Gene : Thecc1EG019489 T. cacao v1.1
Defline:  (1 of 1) PTHR23024//PTHR23024:SF93 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // CARBOXYLESTERASE 17-RELATED Genomic Order:  1424
Name:  ? Thecc1EG019489 Secondary Identifier:  ? PAC:27455839
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6303 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019489 0.5kb upstream 0.5kb upstream 1989 true scaffold_4: 22894163-22896151 Theobroma cacao
Thecc1EG019489 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 22895652-22896151 Theobroma cacao
Thecc1EG019489 0.5kb downstream 0.5kb downstream 1989 true scaffold_4: 22893663-22895651 Theobroma cacao
Thecc1EG019489 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 22893663-22894162 Theobroma cacao
Thecc1EG019489 1.0kb upstream 1.0kb upstream 2489 true scaffold_4: 22894163-22896651 Theobroma cacao
Thecc1EG019489 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 22895652-22896651 Theobroma cacao
Thecc1EG019489 1.0kb downstream 1.0kb downstream 2489 true scaffold_4: 22893163-22895651 Theobroma cacao
Thecc1EG019489 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 22893163-22894162 Theobroma cacao
Thecc1EG019489 2.0kb upstream 2.0kb upstream 3489 true scaffold_4: 22894163-22897651 Theobroma cacao
Thecc1EG019489 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 22895652-22897651 Theobroma cacao
Thecc1EG019489 2.0kb downstream 2.0kb downstream 3489 true scaffold_4: 22892163-22895651 Theobroma cacao
Thecc1EG019489 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 22892163-22894162 Theobroma cacao
Thecc1EG019489 5.0kb upstream 5.0kb upstream 6489 true scaffold_4: 22894163-22900651 Theobroma cacao
Thecc1EG019489 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 22895652-22900651 Theobroma cacao
Thecc1EG019489 5.0kb downstream 5.0kb downstream 6489 true scaffold_4: 22889163-22895651 Theobroma cacao
Thecc1EG019489 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 22889163-22894162 Theobroma cacao
Thecc1EG019489 10.0kb upstream 10.0kb upstream 11489 true scaffold_4: 22894163-22905651 Theobroma cacao
Thecc1EG019489 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 22895652-22905651 Theobroma cacao
Thecc1EG019489 10.0kb downstream 10.0kb downstream 11489 true scaffold_4: 22884163-22895651 Theobroma cacao
Thecc1EG019489 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 22884163-22894162 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836923 5264 Brassicales-Malvales View MSA
124345017 5266 SBM View MSA
124253065 5268 Malvidae View MSA
124065608 5270 Rosid View MSA
123745232 5271 Pentapetalae View MSA
122791893 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain