Gene : Thecc1EG019468 T. cacao v1.1

Defline:  (1 of 3) K10839 - UV excision repair protein RAD23 (RAD23, HR23) Genomic Order:  1415
Name:  ? Thecc1EG019468 Secondary Identifier:  ? PAC:27453493

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019468 0.5kb upstream 0.5kb upstream 8911 true scaffold_4: 22672997-22681907 Theobroma cacao
Thecc1EG019468 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 22672997-22673496 Theobroma cacao
Thecc1EG019468 0.5kb downstream 0.5kb downstream 8911 true scaffold_4: 22673497-22682407 Theobroma cacao
Thecc1EG019468 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 22681908-22682407 Theobroma cacao
Thecc1EG019468 1.0kb upstream 1.0kb upstream 9411 true scaffold_4: 22672497-22681907 Theobroma cacao
Thecc1EG019468 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 22672497-22673496 Theobroma cacao
Thecc1EG019468 1.0kb downstream 1.0kb downstream 9411 true scaffold_4: 22673497-22682907 Theobroma cacao
Thecc1EG019468 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 22681908-22682907 Theobroma cacao
Thecc1EG019468 2.0kb upstream 2.0kb upstream 10411 true scaffold_4: 22671497-22681907 Theobroma cacao
Thecc1EG019468 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 22671497-22673496 Theobroma cacao
Thecc1EG019468 2.0kb downstream 2.0kb downstream 10411 true scaffold_4: 22673497-22683907 Theobroma cacao
Thecc1EG019468 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 22681908-22683907 Theobroma cacao
Thecc1EG019468 5.0kb upstream 5.0kb upstream 13411 true scaffold_4: 22668497-22681907 Theobroma cacao
Thecc1EG019468 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 22668497-22673496 Theobroma cacao
Thecc1EG019468 5.0kb downstream 5.0kb downstream 13411 true scaffold_4: 22673497-22686907 Theobroma cacao
Thecc1EG019468 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 22681908-22686907 Theobroma cacao
Thecc1EG019468 10.0kb upstream 10.0kb upstream 18411 true scaffold_4: 22663497-22681907 Theobroma cacao
Thecc1EG019468 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 22663497-22673496 Theobroma cacao
Thecc1EG019468 10.0kb downstream 10.0kb downstream 18411 true scaffold_4: 22673497-22691907 Theobroma cacao
Thecc1EG019468 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 22681908-22691907 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040911 5273 Angiosperm View MSA
123837452 5264 Brassicales-Malvales View MSA
124347950 5266 SBM View MSA
124244016 5268 Malvidae View MSA
124061978 5270 Rosid View MSA
123736504 5271 Pentapetalae View MSA
122787573 5272 Eudicot View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain