Gene : Thecc1EG019437 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1392
Name:  ? Thecc1EG019437 Secondary Identifier:  ? PAC:27452835
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019437 0.5kb upstream 0.5kb upstream 7168 true scaffold_4: 22409144-22416311 Theobroma cacao
Thecc1EG019437 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 22415812-22416311 Theobroma cacao
Thecc1EG019437 0.5kb downstream 0.5kb downstream 7168 true scaffold_4: 22408644-22415811 Theobroma cacao
Thecc1EG019437 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 22408644-22409143 Theobroma cacao
Thecc1EG019437 1.0kb upstream 1.0kb upstream 7668 true scaffold_4: 22409144-22416811 Theobroma cacao
Thecc1EG019437 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 22415812-22416811 Theobroma cacao
Thecc1EG019437 1.0kb downstream 1.0kb downstream 7668 true scaffold_4: 22408144-22415811 Theobroma cacao
Thecc1EG019437 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 22408144-22409143 Theobroma cacao
Thecc1EG019437 2.0kb upstream 2.0kb upstream 8668 true scaffold_4: 22409144-22417811 Theobroma cacao
Thecc1EG019437 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 22415812-22417811 Theobroma cacao
Thecc1EG019437 2.0kb downstream 2.0kb downstream 8668 true scaffold_4: 22407144-22415811 Theobroma cacao
Thecc1EG019437 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 22407144-22409143 Theobroma cacao
Thecc1EG019437 5.0kb upstream 5.0kb upstream 11668 true scaffold_4: 22409144-22420811 Theobroma cacao
Thecc1EG019437 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 22415812-22420811 Theobroma cacao
Thecc1EG019437 5.0kb downstream 5.0kb downstream 11668 true scaffold_4: 22404144-22415811 Theobroma cacao
Thecc1EG019437 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 22404144-22409143 Theobroma cacao
Thecc1EG019437 10.0kb upstream 10.0kb upstream 16668 true scaffold_4: 22409144-22425811 Theobroma cacao
Thecc1EG019437 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 22415812-22425811 Theobroma cacao
Thecc1EG019437 10.0kb downstream 10.0kb downstream 16668 true scaffold_4: 22399144-22415811 Theobroma cacao
Thecc1EG019437 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 22399144-22409143 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831781 5264 Brassicales-Malvales View MSA
124321746 5266 SBM View MSA
124238283 5268 Malvidae View MSA
124063549 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain