Gene : Thecc1EG019399 T. cacao v1.1
Defline:  (1 of 1) PTHR31846:SF10 - CHLOROPLASTIC GROUP IIA INTRON SPLICING FACILITATOR CRS1, CHLOROPLASTIC Genomic Order:  1370
Name:  ? Thecc1EG019399 Secondary Identifier:  ? PAC:27454449
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019399 0.5kb upstream 0.5kb upstream 6662 true scaffold_4: 22247541-22254202 Theobroma cacao
Thecc1EG019399 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 22253703-22254202 Theobroma cacao
Thecc1EG019399 0.5kb downstream 0.5kb downstream 6662 true scaffold_4: 22247041-22253702 Theobroma cacao
Thecc1EG019399 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 22247041-22247540 Theobroma cacao
Thecc1EG019399 1.0kb upstream 1.0kb upstream 7162 true scaffold_4: 22247541-22254702 Theobroma cacao
Thecc1EG019399 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 22253703-22254702 Theobroma cacao
Thecc1EG019399 1.0kb downstream 1.0kb downstream 7162 true scaffold_4: 22246541-22253702 Theobroma cacao
Thecc1EG019399 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 22246541-22247540 Theobroma cacao
Thecc1EG019399 2.0kb upstream 2.0kb upstream 8162 true scaffold_4: 22247541-22255702 Theobroma cacao
Thecc1EG019399 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 22253703-22255702 Theobroma cacao
Thecc1EG019399 2.0kb downstream 2.0kb downstream 8162 true scaffold_4: 22245541-22253702 Theobroma cacao
Thecc1EG019399 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 22245541-22247540 Theobroma cacao
Thecc1EG019399 5.0kb upstream 5.0kb upstream 11162 true scaffold_4: 22247541-22258702 Theobroma cacao
Thecc1EG019399 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 22253703-22258702 Theobroma cacao
Thecc1EG019399 5.0kb downstream 5.0kb downstream 11162 true scaffold_4: 22242541-22253702 Theobroma cacao
Thecc1EG019399 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 22242541-22247540 Theobroma cacao
Thecc1EG019399 10.0kb upstream 10.0kb upstream 16162 true scaffold_4: 22247541-22263702 Theobroma cacao
Thecc1EG019399 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 22253703-22263702 Theobroma cacao
Thecc1EG019399 10.0kb downstream 10.0kb downstream 16162 true scaffold_4: 22237541-22253702 Theobroma cacao
Thecc1EG019399 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 22237541-22247540 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827349 5264 Brassicales-Malvales View MSA
124337872 5266 SBM View MSA
124243509 5268 Malvidae View MSA
124065924 5270 Rosid View MSA
123748527 5271 Pentapetalae View MSA
122791188 5272 Eudicot View MSA
122046600 5273 Angiosperm View MSA
121310632 5274 Embryophyte View MSA
123348066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain