Gene : Thecc1EG019407 T. cacao v1.1
Defline:  (1 of 25) PF02485 - Core-2/I-Branching enzyme (Branch) Genomic Order:  1373
Name:  ? Thecc1EG019407 Secondary Identifier:  ? PAC:27453125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019407 0.5kb upstream 0.5kb upstream 2375 true scaffold_4: 22287387-22289761 Theobroma cacao
Thecc1EG019407 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 22289262-22289761 Theobroma cacao
Thecc1EG019407 0.5kb downstream 0.5kb downstream 2375 true scaffold_4: 22286887-22289261 Theobroma cacao
Thecc1EG019407 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 22286887-22287386 Theobroma cacao
Thecc1EG019407 1.0kb upstream 1.0kb upstream 2875 true scaffold_4: 22287387-22290261 Theobroma cacao
Thecc1EG019407 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 22289262-22290261 Theobroma cacao
Thecc1EG019407 1.0kb downstream 1.0kb downstream 2875 true scaffold_4: 22286387-22289261 Theobroma cacao
Thecc1EG019407 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 22286387-22287386 Theobroma cacao
Thecc1EG019407 2.0kb upstream 2.0kb upstream 3875 true scaffold_4: 22287387-22291261 Theobroma cacao
Thecc1EG019407 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 22289262-22291261 Theobroma cacao
Thecc1EG019407 2.0kb downstream 2.0kb downstream 3875 true scaffold_4: 22285387-22289261 Theobroma cacao
Thecc1EG019407 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 22285387-22287386 Theobroma cacao
Thecc1EG019407 5.0kb upstream 5.0kb upstream 6875 true scaffold_4: 22287387-22294261 Theobroma cacao
Thecc1EG019407 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 22289262-22294261 Theobroma cacao
Thecc1EG019407 5.0kb downstream 5.0kb downstream 6875 true scaffold_4: 22282387-22289261 Theobroma cacao
Thecc1EG019407 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 22282387-22287386 Theobroma cacao
Thecc1EG019407 10.0kb upstream 10.0kb upstream 11875 true scaffold_4: 22287387-22299261 Theobroma cacao
Thecc1EG019407 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 22289262-22299261 Theobroma cacao
Thecc1EG019407 10.0kb downstream 10.0kb downstream 11875 true scaffold_4: 22277387-22289261 Theobroma cacao
Thecc1EG019407 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 22277387-22287386 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832847 5264 Brassicales-Malvales View MSA
124350412 5266 SBM View MSA
124250808 5268 Malvidae View MSA
124073047 5270 Rosid View MSA
123748428 5271 Pentapetalae View MSA
122794762 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain