Gene : Thecc1EG019727 T. cacao v1.1
Defline:  (1 of 3) PTHR23092//PTHR23092:SF30 - TOPOISOMERASE-RELATED PROTEIN // NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN-RELATED Genomic Order:  1590
Name:  ? Thecc1EG019727 Secondary Identifier:  ? PAC:27454856
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019727 0.5kb upstream 0.5kb upstream 9811 true scaffold_4: 24571978-24581788 Theobroma cacao
Thecc1EG019727 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 24571978-24572477 Theobroma cacao
Thecc1EG019727 0.5kb downstream 0.5kb downstream 9811 true scaffold_4: 24572478-24582288 Theobroma cacao
Thecc1EG019727 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 24581789-24582288 Theobroma cacao
Thecc1EG019727 1.0kb upstream 1.0kb upstream 10311 true scaffold_4: 24571478-24581788 Theobroma cacao
Thecc1EG019727 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 24571478-24572477 Theobroma cacao
Thecc1EG019727 1.0kb downstream 1.0kb downstream 10311 true scaffold_4: 24572478-24582788 Theobroma cacao
Thecc1EG019727 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 24581789-24582788 Theobroma cacao
Thecc1EG019727 2.0kb upstream 2.0kb upstream 11311 true scaffold_4: 24570478-24581788 Theobroma cacao
Thecc1EG019727 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 24570478-24572477 Theobroma cacao
Thecc1EG019727 2.0kb downstream 2.0kb downstream 11311 true scaffold_4: 24572478-24583788 Theobroma cacao
Thecc1EG019727 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 24581789-24583788 Theobroma cacao
Thecc1EG019727 5.0kb upstream 5.0kb upstream 14311 true scaffold_4: 24567478-24581788 Theobroma cacao
Thecc1EG019727 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 24567478-24572477 Theobroma cacao
Thecc1EG019727 5.0kb downstream 5.0kb downstream 14311 true scaffold_4: 24572478-24586788 Theobroma cacao
Thecc1EG019727 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 24581789-24586788 Theobroma cacao
Thecc1EG019727 10.0kb upstream 10.0kb upstream 19311 true scaffold_4: 24562478-24581788 Theobroma cacao
Thecc1EG019727 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 24562478-24572477 Theobroma cacao
Thecc1EG019727 10.0kb downstream 10.0kb downstream 19311 true scaffold_4: 24572478-24591788 Theobroma cacao
Thecc1EG019727 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 24581789-24591788 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834360 5264 Brassicales-Malvales View MSA
124338817 5266 SBM View MSA
124248322 5268 Malvidae View MSA
124069788 5270 Rosid View MSA
123744457 5271 Pentapetalae View MSA
122791987 5272 Eudicot View MSA
122043315 5273 Angiosperm View MSA
121310107 5274 Embryophyte View MSA
123428025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain