Gene : Thecc1EG019728 T. cacao v1.1

Defline:  (1 of 2) PTHR13902//PTHR13902:SF68 - SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  1591
Name:  ? Thecc1EG019728 Secondary Identifier:  ? PAC:27456307

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019728 0.5kb upstream 0.5kb upstream 5384 true scaffold_4: 24583097-24588480 Theobroma cacao
Thecc1EG019728 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 24583097-24583596 Theobroma cacao
Thecc1EG019728 0.5kb downstream 0.5kb downstream 5384 true scaffold_4: 24583597-24588980 Theobroma cacao
Thecc1EG019728 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 24588481-24588980 Theobroma cacao
Thecc1EG019728 1.0kb upstream 1.0kb upstream 5884 true scaffold_4: 24582597-24588480 Theobroma cacao
Thecc1EG019728 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 24582597-24583596 Theobroma cacao
Thecc1EG019728 1.0kb downstream 1.0kb downstream 5884 true scaffold_4: 24583597-24589480 Theobroma cacao
Thecc1EG019728 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 24588481-24589480 Theobroma cacao
Thecc1EG019728 2.0kb upstream 2.0kb upstream 6884 true scaffold_4: 24581597-24588480 Theobroma cacao
Thecc1EG019728 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 24581597-24583596 Theobroma cacao
Thecc1EG019728 2.0kb downstream 2.0kb downstream 6884 true scaffold_4: 24583597-24590480 Theobroma cacao
Thecc1EG019728 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 24588481-24590480 Theobroma cacao
Thecc1EG019728 5.0kb upstream 5.0kb upstream 9884 true scaffold_4: 24578597-24588480 Theobroma cacao
Thecc1EG019728 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 24578597-24583596 Theobroma cacao
Thecc1EG019728 5.0kb downstream 5.0kb downstream 9884 true scaffold_4: 24583597-24593480 Theobroma cacao
Thecc1EG019728 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 24588481-24593480 Theobroma cacao
Thecc1EG019728 10.0kb upstream 10.0kb upstream 14884 true scaffold_4: 24573597-24588480 Theobroma cacao
Thecc1EG019728 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 24573597-24583596 Theobroma cacao
Thecc1EG019728 10.0kb downstream 10.0kb downstream 14884 true scaffold_4: 24583597-24598480 Theobroma cacao
Thecc1EG019728 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 24588481-24598480 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836349 5264 Brassicales-Malvales View MSA
124339239 5266 SBM View MSA
124251025 5268 Malvidae View MSA
124069473 5270 Rosid View MSA
123738029 5271 Pentapetalae View MSA
122785991 5272 Eudicot View MSA
122041830 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121309892 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain