Gene : Thecc1EG019651 T. cacao v1.1
Defline:  (1 of 45) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1528
Name:  ? Thecc1EG019651 Secondary Identifier:  ? PAC:27455807
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019651 0.5kb upstream 0.5kb upstream 3528 true scaffold_4: 24120225-24123752 Theobroma cacao
Thecc1EG019651 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 24120225-24120724 Theobroma cacao
Thecc1EG019651 0.5kb downstream 0.5kb downstream 3528 true scaffold_4: 24120725-24124252 Theobroma cacao
Thecc1EG019651 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 24123753-24124252 Theobroma cacao
Thecc1EG019651 1.0kb upstream 1.0kb upstream 4028 true scaffold_4: 24119725-24123752 Theobroma cacao
Thecc1EG019651 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 24119725-24120724 Theobroma cacao
Thecc1EG019651 1.0kb downstream 1.0kb downstream 4028 true scaffold_4: 24120725-24124752 Theobroma cacao
Thecc1EG019651 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 24123753-24124752 Theobroma cacao
Thecc1EG019651 2.0kb upstream 2.0kb upstream 5028 true scaffold_4: 24118725-24123752 Theobroma cacao
Thecc1EG019651 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 24118725-24120724 Theobroma cacao
Thecc1EG019651 2.0kb downstream 2.0kb downstream 5028 true scaffold_4: 24120725-24125752 Theobroma cacao
Thecc1EG019651 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 24123753-24125752 Theobroma cacao
Thecc1EG019651 5.0kb upstream 5.0kb upstream 8028 true scaffold_4: 24115725-24123752 Theobroma cacao
Thecc1EG019651 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 24115725-24120724 Theobroma cacao
Thecc1EG019651 5.0kb downstream 5.0kb downstream 8028 true scaffold_4: 24120725-24128752 Theobroma cacao
Thecc1EG019651 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 24123753-24128752 Theobroma cacao
Thecc1EG019651 10.0kb upstream 10.0kb upstream 13028 true scaffold_4: 24110725-24123752 Theobroma cacao
Thecc1EG019651 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 24110725-24120724 Theobroma cacao
Thecc1EG019651 10.0kb downstream 10.0kb downstream 13028 true scaffold_4: 24120725-24133752 Theobroma cacao
Thecc1EG019651 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 24123753-24133752 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829407 5264 Brassicales-Malvales View MSA
124336947 5266 SBM View MSA
124237102 5268 Malvidae View MSA
124067388 5270 Rosid View MSA
123740629 5271 Pentapetalae View MSA
122786381 5272 Eudicot View MSA
122046453 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310608 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain