Gene : Thecc1EG019635 T. cacao v1.1

Defline:  (1 of 2) PTHR34191//PTHR34191:SF2 - FAMILY NOT NAMED // STRESS-INDUCED PROTEIN KIN1-RELATED Genomic Order:  1513
Name:  ? Thecc1EG019635 Secondary Identifier:  ? PAC:27454566

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019635 0.5kb upstream 0.5kb upstream 1781 true scaffold_4: 24042215-24043995 Theobroma cacao
Thecc1EG019635 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 24042215-24042714 Theobroma cacao
Thecc1EG019635 0.5kb downstream 0.5kb downstream 1781 true scaffold_4: 24042715-24044495 Theobroma cacao
Thecc1EG019635 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 24043996-24044495 Theobroma cacao
Thecc1EG019635 1.0kb upstream 1.0kb upstream 2281 true scaffold_4: 24041715-24043995 Theobroma cacao
Thecc1EG019635 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 24041715-24042714 Theobroma cacao
Thecc1EG019635 1.0kb downstream 1.0kb downstream 2281 true scaffold_4: 24042715-24044995 Theobroma cacao
Thecc1EG019635 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 24043996-24044995 Theobroma cacao
Thecc1EG019635 2.0kb upstream 2.0kb upstream 3281 true scaffold_4: 24040715-24043995 Theobroma cacao
Thecc1EG019635 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 24040715-24042714 Theobroma cacao
Thecc1EG019635 2.0kb downstream 2.0kb downstream 3281 true scaffold_4: 24042715-24045995 Theobroma cacao
Thecc1EG019635 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 24043996-24045995 Theobroma cacao
Thecc1EG019635 5.0kb upstream 5.0kb upstream 6281 true scaffold_4: 24037715-24043995 Theobroma cacao
Thecc1EG019635 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 24037715-24042714 Theobroma cacao
Thecc1EG019635 5.0kb downstream 5.0kb downstream 6281 true scaffold_4: 24042715-24048995 Theobroma cacao
Thecc1EG019635 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 24043996-24048995 Theobroma cacao
Thecc1EG019635 10.0kb upstream 10.0kb upstream 11281 true scaffold_4: 24032715-24043995 Theobroma cacao
Thecc1EG019635 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 24032715-24042714 Theobroma cacao
Thecc1EG019635 10.0kb downstream 10.0kb downstream 11281 true scaffold_4: 24042715-24053995 Theobroma cacao
Thecc1EG019635 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 24043996-24053995 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838955 5264 Brassicales-Malvales View MSA
124337448 5266 SBM View MSA
124248730 5268 Malvidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain