Gene : Thecc1EG019968 T. cacao v1.1
Defline:  (1 of 4) PF12579 - Protein of unknown function (DUF3755) (DUF3755) Genomic Order:  1776
Name:  ? Thecc1EG019968 Secondary Identifier:  ? PAC:27454233
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019968 0.5kb upstream 0.5kb upstream 32992 true scaffold_4: 25905031-25938022 Theobroma cacao
Thecc1EG019968 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 25905031-25905530 Theobroma cacao
Thecc1EG019968 0.5kb downstream 0.5kb downstream 32992 true scaffold_4: 25905531-25938522 Theobroma cacao
Thecc1EG019968 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 25938023-25938522 Theobroma cacao
Thecc1EG019968 1.0kb upstream 1.0kb upstream 33492 true scaffold_4: 25904531-25938022 Theobroma cacao
Thecc1EG019968 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 25904531-25905530 Theobroma cacao
Thecc1EG019968 1.0kb downstream 1.0kb downstream 33492 true scaffold_4: 25905531-25939022 Theobroma cacao
Thecc1EG019968 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 25938023-25939022 Theobroma cacao
Thecc1EG019968 2.0kb upstream 2.0kb upstream 34492 true scaffold_4: 25903531-25938022 Theobroma cacao
Thecc1EG019968 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 25903531-25905530 Theobroma cacao
Thecc1EG019968 2.0kb downstream 2.0kb downstream 34492 true scaffold_4: 25905531-25940022 Theobroma cacao
Thecc1EG019968 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 25938023-25940022 Theobroma cacao
Thecc1EG019968 5.0kb upstream 5.0kb upstream 37492 true scaffold_4: 25900531-25938022 Theobroma cacao
Thecc1EG019968 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 25900531-25905530 Theobroma cacao
Thecc1EG019968 5.0kb downstream 5.0kb downstream 37492 true scaffold_4: 25905531-25943022 Theobroma cacao
Thecc1EG019968 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 25938023-25943022 Theobroma cacao
Thecc1EG019968 10.0kb upstream 10.0kb upstream 42492 true scaffold_4: 25895531-25938022 Theobroma cacao
Thecc1EG019968 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 25895531-25905530 Theobroma cacao
Thecc1EG019968 10.0kb downstream 10.0kb downstream 42492 true scaffold_4: 25905531-25948022 Theobroma cacao
Thecc1EG019968 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 25938023-25948022 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041164 5273 Angiosperm View MSA
123819403 5264 Brassicales-Malvales Singleton cluster - no MSA
124315664 5266 SBM Singleton cluster - no MSA
124249220 5268 Malvidae View MSA
124073841 5270 Rosid View MSA
123747001 5271 Pentapetalae View MSA
122788149 5272 Eudicot View MSA
121349043 5274 Embryophyte View MSA
123381139 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain