Gene : Thecc1EG019947 T. cacao v1.1
Defline:  DNA double-strand break repair rad50 ATPase Genomic Order:  1769
Name:  ? Thecc1EG019947 Secondary Identifier:  ? PAC:27455674
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019947 0.5kb upstream 0.5kb upstream 4805 true scaffold_4: 25833242-25838046 Theobroma cacao
Thecc1EG019947 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 25833242-25833741 Theobroma cacao
Thecc1EG019947 0.5kb downstream 0.5kb downstream 4805 true scaffold_4: 25833742-25838546 Theobroma cacao
Thecc1EG019947 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 25838047-25838546 Theobroma cacao
Thecc1EG019947 1.0kb upstream 1.0kb upstream 5305 true scaffold_4: 25832742-25838046 Theobroma cacao
Thecc1EG019947 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 25832742-25833741 Theobroma cacao
Thecc1EG019947 1.0kb downstream 1.0kb downstream 5305 true scaffold_4: 25833742-25839046 Theobroma cacao
Thecc1EG019947 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 25838047-25839046 Theobroma cacao
Thecc1EG019947 2.0kb upstream 2.0kb upstream 6305 true scaffold_4: 25831742-25838046 Theobroma cacao
Thecc1EG019947 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 25831742-25833741 Theobroma cacao
Thecc1EG019947 2.0kb downstream 2.0kb downstream 6305 true scaffold_4: 25833742-25840046 Theobroma cacao
Thecc1EG019947 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 25838047-25840046 Theobroma cacao
Thecc1EG019947 5.0kb upstream 5.0kb upstream 9305 true scaffold_4: 25828742-25838046 Theobroma cacao
Thecc1EG019947 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 25828742-25833741 Theobroma cacao
Thecc1EG019947 5.0kb downstream 5.0kb downstream 9305 true scaffold_4: 25833742-25843046 Theobroma cacao
Thecc1EG019947 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 25838047-25843046 Theobroma cacao
Thecc1EG019947 10.0kb upstream 10.0kb upstream 14305 true scaffold_4: 25823742-25838046 Theobroma cacao
Thecc1EG019947 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 25823742-25833741 Theobroma cacao
Thecc1EG019947 10.0kb downstream 10.0kb downstream 14305 true scaffold_4: 25833742-25848046 Theobroma cacao
Thecc1EG019947 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 25838047-25848046 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829249 5264 Brassicales-Malvales View MSA
124346588 5266 SBM View MSA
124242102 5268 Malvidae View MSA
124061999 5270 Rosid View MSA
123741146 5271 Pentapetalae View MSA
122770010 5272 Eudicot View MSA
122046829 5273 Angiosperm View MSA
121348564 5274 Embryophyte View MSA
123380915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain