Gene : Thecc1EG019926 T. cacao v1.1
Defline:  (1 of 1) PTHR31852//PTHR31852:SF43 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  1753
Name:  ? Thecc1EG019926 Secondary Identifier:  ? PAC:27455293
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019926 0.5kb upstream 0.5kb upstream 3145 true scaffold_4: 25751228-25754372 Theobroma cacao
Thecc1EG019926 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 25751228-25751727 Theobroma cacao
Thecc1EG019926 0.5kb downstream 0.5kb downstream 3145 true scaffold_4: 25751728-25754872 Theobroma cacao
Thecc1EG019926 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 25754373-25754872 Theobroma cacao
Thecc1EG019926 1.0kb upstream 1.0kb upstream 3645 true scaffold_4: 25750728-25754372 Theobroma cacao
Thecc1EG019926 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 25750728-25751727 Theobroma cacao
Thecc1EG019926 1.0kb downstream 1.0kb downstream 3645 true scaffold_4: 25751728-25755372 Theobroma cacao
Thecc1EG019926 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 25754373-25755372 Theobroma cacao
Thecc1EG019926 2.0kb upstream 2.0kb upstream 4645 true scaffold_4: 25749728-25754372 Theobroma cacao
Thecc1EG019926 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 25749728-25751727 Theobroma cacao
Thecc1EG019926 2.0kb downstream 2.0kb downstream 4645 true scaffold_4: 25751728-25756372 Theobroma cacao
Thecc1EG019926 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 25754373-25756372 Theobroma cacao
Thecc1EG019926 5.0kb upstream 5.0kb upstream 7645 true scaffold_4: 25746728-25754372 Theobroma cacao
Thecc1EG019926 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 25746728-25751727 Theobroma cacao
Thecc1EG019926 5.0kb downstream 5.0kb downstream 7645 true scaffold_4: 25751728-25759372 Theobroma cacao
Thecc1EG019926 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 25754373-25759372 Theobroma cacao
Thecc1EG019926 10.0kb upstream 10.0kb upstream 12645 true scaffold_4: 25741728-25754372 Theobroma cacao
Thecc1EG019926 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 25741728-25751727 Theobroma cacao
Thecc1EG019926 10.0kb downstream 10.0kb downstream 12645 true scaffold_4: 25751728-25764372 Theobroma cacao
Thecc1EG019926 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 25754373-25764372 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832801 5264 Brassicales-Malvales View MSA
124344084 5266 SBM View MSA
124253171 5268 Malvidae View MSA
124068918 5270 Rosid View MSA
123743107 5271 Pentapetalae View MSA
122794839 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain