Gene : Thecc1EG019914 T. cacao v1.1
Defline:  (1 of 3) PTHR22595//PTHR22595:SF61 - CHITINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1743
Name:  ? Thecc1EG019914 Secondary Identifier:  ? PAC:27453647
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019914 0.5kb upstream 0.5kb upstream 5324 true scaffold_4: 25704522-25709845 Theobroma cacao
Thecc1EG019914 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 25704522-25705021 Theobroma cacao
Thecc1EG019914 0.5kb downstream 0.5kb downstream 5324 true scaffold_4: 25705022-25710345 Theobroma cacao
Thecc1EG019914 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 25709846-25710345 Theobroma cacao
Thecc1EG019914 1.0kb upstream 1.0kb upstream 5824 true scaffold_4: 25704022-25709845 Theobroma cacao
Thecc1EG019914 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 25704022-25705021 Theobroma cacao
Thecc1EG019914 1.0kb downstream 1.0kb downstream 5824 true scaffold_4: 25705022-25710845 Theobroma cacao
Thecc1EG019914 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 25709846-25710845 Theobroma cacao
Thecc1EG019914 2.0kb upstream 2.0kb upstream 6824 true scaffold_4: 25703022-25709845 Theobroma cacao
Thecc1EG019914 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 25703022-25705021 Theobroma cacao
Thecc1EG019914 2.0kb downstream 2.0kb downstream 6824 true scaffold_4: 25705022-25711845 Theobroma cacao
Thecc1EG019914 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 25709846-25711845 Theobroma cacao
Thecc1EG019914 5.0kb upstream 5.0kb upstream 9824 true scaffold_4: 25700022-25709845 Theobroma cacao
Thecc1EG019914 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 25700022-25705021 Theobroma cacao
Thecc1EG019914 5.0kb downstream 5.0kb downstream 9824 true scaffold_4: 25705022-25714845 Theobroma cacao
Thecc1EG019914 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 25709846-25714845 Theobroma cacao
Thecc1EG019914 10.0kb upstream 10.0kb upstream 14824 true scaffold_4: 25695022-25709845 Theobroma cacao
Thecc1EG019914 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 25695022-25705021 Theobroma cacao
Thecc1EG019914 10.0kb downstream 10.0kb downstream 14824 true scaffold_4: 25705022-25719845 Theobroma cacao
Thecc1EG019914 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 25709846-25719845 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041402 5273 Angiosperm View MSA
123830330 5264 Brassicales-Malvales View MSA
124339260 5266 SBM View MSA
124252147 5268 Malvidae View MSA
124072738 5270 Rosid View MSA
123744755 5271 Pentapetalae View MSA
122789729 5272 Eudicot View MSA
121351498 5274 Embryophyte View MSA
123382192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain