Gene : Thecc1EG019840 T. cacao v1.1
Defline:  (1 of 2) K02932 - large subunit ribosomal protein L5e (RP-L5e, RPL5) Genomic Order:  1681
Name:  ? Thecc1EG019840 Secondary Identifier:  ? PAC:27454075
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019840 0.5kb upstream 0.5kb upstream 3489 true scaffold_4: 25269141-25272629 Theobroma cacao
Thecc1EG019840 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 25272130-25272629 Theobroma cacao
Thecc1EG019840 0.5kb downstream 0.5kb downstream 3489 true scaffold_4: 25268641-25272129 Theobroma cacao
Thecc1EG019840 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 25268641-25269140 Theobroma cacao
Thecc1EG019840 1.0kb upstream 1.0kb upstream 3989 true scaffold_4: 25269141-25273129 Theobroma cacao
Thecc1EG019840 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 25272130-25273129 Theobroma cacao
Thecc1EG019840 1.0kb downstream 1.0kb downstream 3989 true scaffold_4: 25268141-25272129 Theobroma cacao
Thecc1EG019840 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 25268141-25269140 Theobroma cacao
Thecc1EG019840 2.0kb upstream 2.0kb upstream 4989 true scaffold_4: 25269141-25274129 Theobroma cacao
Thecc1EG019840 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 25272130-25274129 Theobroma cacao
Thecc1EG019840 2.0kb downstream 2.0kb downstream 4989 true scaffold_4: 25267141-25272129 Theobroma cacao
Thecc1EG019840 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 25267141-25269140 Theobroma cacao
Thecc1EG019840 5.0kb upstream 5.0kb upstream 7989 true scaffold_4: 25269141-25277129 Theobroma cacao
Thecc1EG019840 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 25272130-25277129 Theobroma cacao
Thecc1EG019840 5.0kb downstream 5.0kb downstream 7989 true scaffold_4: 25264141-25272129 Theobroma cacao
Thecc1EG019840 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 25264141-25269140 Theobroma cacao
Thecc1EG019840 10.0kb upstream 10.0kb upstream 12989 true scaffold_4: 25269141-25282129 Theobroma cacao
Thecc1EG019840 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 25272130-25282129 Theobroma cacao
Thecc1EG019840 10.0kb downstream 10.0kb downstream 12989 true scaffold_4: 25259141-25272129 Theobroma cacao
Thecc1EG019840 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 25259141-25269140 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831832 5264 Brassicales-Malvales View MSA
124349835 5266 SBM View MSA
124252633 5268 Malvidae View MSA
124061233 5270 Rosid View MSA
123751479 5271 Pentapetalae View MSA
122787634 5272 Eudicot View MSA
122045073 5273 Angiosperm View MSA
121347703 5274 Embryophyte View MSA
123424766 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain