Gene : Thecc1EG020038 T. cacao v1.1
Defline:  (1 of 37) PF03101 - FAR1 DNA-binding domain (FAR1) Genomic Order:  1840
Name:  ? Thecc1EG020038 Secondary Identifier:  ? PAC:27453148
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020038 0.5kb upstream 0.5kb upstream 6259 true scaffold_4: 26284322-26290580 Theobroma cacao
Thecc1EG020038 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 26284322-26284821 Theobroma cacao
Thecc1EG020038 0.5kb downstream 0.5kb downstream 6259 true scaffold_4: 26284822-26291080 Theobroma cacao
Thecc1EG020038 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 26290581-26291080 Theobroma cacao
Thecc1EG020038 1.0kb upstream 1.0kb upstream 6759 true scaffold_4: 26283822-26290580 Theobroma cacao
Thecc1EG020038 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 26283822-26284821 Theobroma cacao
Thecc1EG020038 1.0kb downstream 1.0kb downstream 6759 true scaffold_4: 26284822-26291580 Theobroma cacao
Thecc1EG020038 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 26290581-26291580 Theobroma cacao
Thecc1EG020038 2.0kb upstream 2.0kb upstream 7759 true scaffold_4: 26282822-26290580 Theobroma cacao
Thecc1EG020038 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 26282822-26284821 Theobroma cacao
Thecc1EG020038 2.0kb downstream 2.0kb downstream 7759 true scaffold_4: 26284822-26292580 Theobroma cacao
Thecc1EG020038 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 26290581-26292580 Theobroma cacao
Thecc1EG020038 5.0kb upstream 5.0kb upstream 10759 true scaffold_4: 26279822-26290580 Theobroma cacao
Thecc1EG020038 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 26279822-26284821 Theobroma cacao
Thecc1EG020038 5.0kb downstream 5.0kb downstream 10759 true scaffold_4: 26284822-26295580 Theobroma cacao
Thecc1EG020038 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 26290581-26295580 Theobroma cacao
Thecc1EG020038 10.0kb upstream 10.0kb upstream 15759 true scaffold_4: 26274822-26290580 Theobroma cacao
Thecc1EG020038 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 26274822-26284821 Theobroma cacao
Thecc1EG020038 10.0kb downstream 10.0kb downstream 15759 true scaffold_4: 26284822-26300580 Theobroma cacao
Thecc1EG020038 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 26290581-26300580 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819171 5264 Brassicales-Malvales Singleton cluster - no MSA
124315444 5266 SBM Singleton cluster - no MSA
124164354 5268 Malvidae Singleton cluster - no MSA
124071677 5270 Rosid View MSA
123628036 5271 Pentapetalae View MSA
122662351 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain