Gene : Thecc1EG020263 T. cacao v1.1

Defline:  Uncharacterized protein (58%P) Genomic Order:  2029
Name:  ? Thecc1EG020263 Secondary Identifier:  ? PAC:27454524

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020263 0.5kb upstream 0.5kb upstream 1020 true scaffold_4: 27549945-27550964 Theobroma cacao
Thecc1EG020263 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27549945-27550444 Theobroma cacao
Thecc1EG020263 0.5kb downstream 0.5kb downstream 1020 true scaffold_4: 27550445-27551464 Theobroma cacao
Thecc1EG020263 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27550965-27551464 Theobroma cacao
Thecc1EG020263 1.0kb upstream 1.0kb upstream 1520 true scaffold_4: 27549445-27550964 Theobroma cacao
Thecc1EG020263 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27549445-27550444 Theobroma cacao
Thecc1EG020263 1.0kb downstream 1.0kb downstream 1520 true scaffold_4: 27550445-27551964 Theobroma cacao
Thecc1EG020263 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27550965-27551964 Theobroma cacao
Thecc1EG020263 2.0kb upstream 2.0kb upstream 2520 true scaffold_4: 27548445-27550964 Theobroma cacao
Thecc1EG020263 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27548445-27550444 Theobroma cacao
Thecc1EG020263 2.0kb downstream 2.0kb downstream 2520 true scaffold_4: 27550445-27552964 Theobroma cacao
Thecc1EG020263 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27550965-27552964 Theobroma cacao
Thecc1EG020263 5.0kb upstream 5.0kb upstream 5520 true scaffold_4: 27545445-27550964 Theobroma cacao
Thecc1EG020263 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27545445-27550444 Theobroma cacao
Thecc1EG020263 5.0kb downstream 5.0kb downstream 5520 true scaffold_4: 27550445-27555964 Theobroma cacao
Thecc1EG020263 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27550965-27555964 Theobroma cacao
Thecc1EG020263 10.0kb upstream 10.0kb upstream 10520 true scaffold_4: 27540445-27550964 Theobroma cacao
Thecc1EG020263 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27540445-27550444 Theobroma cacao
Thecc1EG020263 10.0kb downstream 10.0kb downstream 10520 true scaffold_4: 27550445-27560964 Theobroma cacao
Thecc1EG020263 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27550965-27560964 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829532 5264 Brassicales-Malvales View MSA
124344058 5266 SBM View MSA
124241871 5268 Malvidae View MSA
124061519 5270 Rosid View MSA
123741482 5271 Pentapetalae View MSA
122792533 5272 Eudicot View MSA
122041645 5273 Angiosperm View MSA
121343821 5274 Embryophyte View MSA
123426521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain