Gene : Thecc1EG020257 T. cacao v1.1
Defline:  (1 of 182) PF00646 - F-box domain (F-box) Genomic Order:  2023
Name:  ? Thecc1EG020257 Secondary Identifier:  ? PAC:27454183
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020257 0.5kb upstream 0.5kb upstream 1400 true scaffold_4: 27513514-27514913 Theobroma cacao
Thecc1EG020257 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27514414-27514913 Theobroma cacao
Thecc1EG020257 0.5kb downstream 0.5kb downstream 1400 true scaffold_4: 27513014-27514413 Theobroma cacao
Thecc1EG020257 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27513014-27513513 Theobroma cacao
Thecc1EG020257 1.0kb upstream 1.0kb upstream 1900 true scaffold_4: 27513514-27515413 Theobroma cacao
Thecc1EG020257 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27514414-27515413 Theobroma cacao
Thecc1EG020257 1.0kb downstream 1.0kb downstream 1900 true scaffold_4: 27512514-27514413 Theobroma cacao
Thecc1EG020257 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27512514-27513513 Theobroma cacao
Thecc1EG020257 2.0kb upstream 2.0kb upstream 2900 true scaffold_4: 27513514-27516413 Theobroma cacao
Thecc1EG020257 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27514414-27516413 Theobroma cacao
Thecc1EG020257 2.0kb downstream 2.0kb downstream 2900 true scaffold_4: 27511514-27514413 Theobroma cacao
Thecc1EG020257 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27511514-27513513 Theobroma cacao
Thecc1EG020257 5.0kb upstream 5.0kb upstream 5900 true scaffold_4: 27513514-27519413 Theobroma cacao
Thecc1EG020257 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27514414-27519413 Theobroma cacao
Thecc1EG020257 5.0kb downstream 5.0kb downstream 5900 true scaffold_4: 27508514-27514413 Theobroma cacao
Thecc1EG020257 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27508514-27513513 Theobroma cacao
Thecc1EG020257 10.0kb upstream 10.0kb upstream 10900 true scaffold_4: 27513514-27524413 Theobroma cacao
Thecc1EG020257 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27514414-27524413 Theobroma cacao
Thecc1EG020257 10.0kb downstream 10.0kb downstream 10900 true scaffold_4: 27503514-27514413 Theobroma cacao
Thecc1EG020257 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27503514-27513513 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841581 5264 Brassicales-Malvales View MSA
124347624 5266 SBM View MSA
124254638 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain