Gene : Thecc1EG020210 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1984
Name:  ? Thecc1EG020210 Secondary Identifier:  ? PAC:27454323
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020210 0.5kb upstream 0.5kb upstream 2961 true scaffold_4: 27296150-27299110 Theobroma cacao
Thecc1EG020210 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27296150-27296649 Theobroma cacao
Thecc1EG020210 0.5kb downstream 0.5kb downstream 2961 true scaffold_4: 27296650-27299610 Theobroma cacao
Thecc1EG020210 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27299111-27299610 Theobroma cacao
Thecc1EG020210 1.0kb upstream 1.0kb upstream 3461 true scaffold_4: 27295650-27299110 Theobroma cacao
Thecc1EG020210 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27295650-27296649 Theobroma cacao
Thecc1EG020210 1.0kb downstream 1.0kb downstream 3461 true scaffold_4: 27296650-27300110 Theobroma cacao
Thecc1EG020210 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27299111-27300110 Theobroma cacao
Thecc1EG020210 2.0kb upstream 2.0kb upstream 4461 true scaffold_4: 27294650-27299110 Theobroma cacao
Thecc1EG020210 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27294650-27296649 Theobroma cacao
Thecc1EG020210 2.0kb downstream 2.0kb downstream 4461 true scaffold_4: 27296650-27301110 Theobroma cacao
Thecc1EG020210 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27299111-27301110 Theobroma cacao
Thecc1EG020210 5.0kb upstream 5.0kb upstream 7461 true scaffold_4: 27291650-27299110 Theobroma cacao
Thecc1EG020210 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27291650-27296649 Theobroma cacao
Thecc1EG020210 5.0kb downstream 5.0kb downstream 7461 true scaffold_4: 27296650-27304110 Theobroma cacao
Thecc1EG020210 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27299111-27304110 Theobroma cacao
Thecc1EG020210 10.0kb upstream 10.0kb upstream 12461 true scaffold_4: 27286650-27299110 Theobroma cacao
Thecc1EG020210 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27286650-27296649 Theobroma cacao
Thecc1EG020210 10.0kb downstream 10.0kb downstream 12461 true scaffold_4: 27296650-27309110 Theobroma cacao
Thecc1EG020210 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27299111-27309110 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026319 5273 Angiosperm View MSA
123828733 5264 Brassicales-Malvales View MSA
124338001 5266 SBM View MSA
124241695 5268 Malvidae View MSA
124064150 5270 Rosid View MSA
123738212 5271 Pentapetalae View MSA
122786215 5272 Eudicot View MSA
121296277 5274 Embryophyte View MSA
123334471 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain