Gene : Thecc1EG020197 T. cacao v1.1
Defline:  (1 of 2) PTHR33926//PTHR33926:SF1 - FAMILY NOT NAMED // PROTEIN TIC 22-LIKE, CHLOROPLASTIC Genomic Order:  1972
Name:  ? Thecc1EG020197 Secondary Identifier:  ? PAC:27452841
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020197 0.5kb upstream 0.5kb upstream 6710 true scaffold_4: 27222620-27229329 Theobroma cacao
Thecc1EG020197 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27222620-27223119 Theobroma cacao
Thecc1EG020197 0.5kb downstream 0.5kb downstream 6710 true scaffold_4: 27223120-27229829 Theobroma cacao
Thecc1EG020197 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27229330-27229829 Theobroma cacao
Thecc1EG020197 1.0kb upstream 1.0kb upstream 7210 true scaffold_4: 27222120-27229329 Theobroma cacao
Thecc1EG020197 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27222120-27223119 Theobroma cacao
Thecc1EG020197 1.0kb downstream 1.0kb downstream 7210 true scaffold_4: 27223120-27230329 Theobroma cacao
Thecc1EG020197 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27229330-27230329 Theobroma cacao
Thecc1EG020197 2.0kb upstream 2.0kb upstream 8210 true scaffold_4: 27221120-27229329 Theobroma cacao
Thecc1EG020197 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27221120-27223119 Theobroma cacao
Thecc1EG020197 2.0kb downstream 2.0kb downstream 8210 true scaffold_4: 27223120-27231329 Theobroma cacao
Thecc1EG020197 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27229330-27231329 Theobroma cacao
Thecc1EG020197 5.0kb upstream 5.0kb upstream 11210 true scaffold_4: 27218120-27229329 Theobroma cacao
Thecc1EG020197 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27218120-27223119 Theobroma cacao
Thecc1EG020197 5.0kb downstream 5.0kb downstream 11210 true scaffold_4: 27223120-27234329 Theobroma cacao
Thecc1EG020197 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27229330-27234329 Theobroma cacao
Thecc1EG020197 10.0kb upstream 10.0kb upstream 16210 true scaffold_4: 27213120-27229329 Theobroma cacao
Thecc1EG020197 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27213120-27223119 Theobroma cacao
Thecc1EG020197 10.0kb downstream 10.0kb downstream 16210 true scaffold_4: 27223120-27239329 Theobroma cacao
Thecc1EG020197 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27229330-27239329 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819106 5264 Brassicales-Malvales Singleton cluster - no MSA
124315383 5266 SBM Singleton cluster - no MSA
124164303 5268 Malvidae Singleton cluster - no MSA
124069208 5270 Rosid View MSA
123743684 5271 Pentapetalae View MSA
122792985 5272 Eudicot View MSA
122046686 5273 Angiosperm View MSA
121348613 5274 Embryophyte View MSA
123424659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain