Gene : Thecc1EG020181 T. cacao v1.1
Defline:  (1 of 2) K09667 - protein O-GlcNAc transferase (OGT) Genomic Order:  1960
Name:  ? Thecc1EG020181 Secondary Identifier:  ? PAC:27453550
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7437 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020181 0.5kb upstream 0.5kb upstream 15944 true scaffold_4: 27129083-27145026 Theobroma cacao
Thecc1EG020181 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27144527-27145026 Theobroma cacao
Thecc1EG020181 0.5kb downstream 0.5kb downstream 15944 true scaffold_4: 27128583-27144526 Theobroma cacao
Thecc1EG020181 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27128583-27129082 Theobroma cacao
Thecc1EG020181 1.0kb upstream 1.0kb upstream 16444 true scaffold_4: 27129083-27145526 Theobroma cacao
Thecc1EG020181 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27144527-27145526 Theobroma cacao
Thecc1EG020181 1.0kb downstream 1.0kb downstream 16444 true scaffold_4: 27128083-27144526 Theobroma cacao
Thecc1EG020181 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27128083-27129082 Theobroma cacao
Thecc1EG020181 2.0kb upstream 2.0kb upstream 17444 true scaffold_4: 27129083-27146526 Theobroma cacao
Thecc1EG020181 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27144527-27146526 Theobroma cacao
Thecc1EG020181 2.0kb downstream 2.0kb downstream 17444 true scaffold_4: 27127083-27144526 Theobroma cacao
Thecc1EG020181 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27127083-27129082 Theobroma cacao
Thecc1EG020181 5.0kb upstream 5.0kb upstream 20444 true scaffold_4: 27129083-27149526 Theobroma cacao
Thecc1EG020181 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27144527-27149526 Theobroma cacao
Thecc1EG020181 5.0kb downstream 5.0kb downstream 20444 true scaffold_4: 27124083-27144526 Theobroma cacao
Thecc1EG020181 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27124083-27129082 Theobroma cacao
Thecc1EG020181 10.0kb upstream 10.0kb upstream 25444 true scaffold_4: 27129083-27154526 Theobroma cacao
Thecc1EG020181 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27144527-27154526 Theobroma cacao
Thecc1EG020181 10.0kb downstream 10.0kb downstream 25444 true scaffold_4: 27119083-27144526 Theobroma cacao
Thecc1EG020181 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27119083-27129082 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825501 5264 Brassicales-Malvales View MSA
124320632 5266 SBM View MSA
124168712 5268 Malvidae View MSA
124065176 5270 Rosid View MSA
123737161 5271 Pentapetalae View MSA
122791107 5272 Eudicot View MSA
122047286 5273 Angiosperm View MSA
121344424 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain