Gene : Thecc1EG020153 T. cacao v1.1
Defline:  (1 of 9) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  1937
Name:  ? Thecc1EG020153 Secondary Identifier:  ? PAC:27456153
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020153 0.5kb upstream 0.5kb upstream 10396 true scaffold_4: 26961745-26972140 Theobroma cacao
Thecc1EG020153 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 26971641-26972140 Theobroma cacao
Thecc1EG020153 0.5kb downstream 0.5kb downstream 10396 true scaffold_4: 26961245-26971640 Theobroma cacao
Thecc1EG020153 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 26961245-26961744 Theobroma cacao
Thecc1EG020153 1.0kb upstream 1.0kb upstream 10896 true scaffold_4: 26961745-26972640 Theobroma cacao
Thecc1EG020153 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 26971641-26972640 Theobroma cacao
Thecc1EG020153 1.0kb downstream 1.0kb downstream 10896 true scaffold_4: 26960745-26971640 Theobroma cacao
Thecc1EG020153 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 26960745-26961744 Theobroma cacao
Thecc1EG020153 2.0kb upstream 2.0kb upstream 11896 true scaffold_4: 26961745-26973640 Theobroma cacao
Thecc1EG020153 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 26971641-26973640 Theobroma cacao
Thecc1EG020153 2.0kb downstream 2.0kb downstream 11896 true scaffold_4: 26959745-26971640 Theobroma cacao
Thecc1EG020153 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 26959745-26961744 Theobroma cacao
Thecc1EG020153 5.0kb upstream 5.0kb upstream 14896 true scaffold_4: 26961745-26976640 Theobroma cacao
Thecc1EG020153 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 26971641-26976640 Theobroma cacao
Thecc1EG020153 5.0kb downstream 5.0kb downstream 14896 true scaffold_4: 26956745-26971640 Theobroma cacao
Thecc1EG020153 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 26956745-26961744 Theobroma cacao
Thecc1EG020153 10.0kb upstream 10.0kb upstream 19896 true scaffold_4: 26961745-26981640 Theobroma cacao
Thecc1EG020153 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 26971641-26981640 Theobroma cacao
Thecc1EG020153 10.0kb downstream 10.0kb downstream 19896 true scaffold_4: 26951745-26971640 Theobroma cacao
Thecc1EG020153 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 26951745-26961744 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825281 5264 Brassicales-Malvales View MSA
124347458 5266 SBM View MSA
124245504 5268 Malvidae View MSA
124070099 5270 Rosid View MSA
123749357 5271 Pentapetalae View MSA
122797493 5272 Eudicot View MSA
122048328 5273 Angiosperm View MSA
121310931 5274 Embryophyte View MSA
123348303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain