Gene : Thecc1EG020446 T. cacao v1.1
Defline:  (1 of 1) K02257 - protoheme IX farnesyltransferase (COX10) Genomic Order:  2192
Name:  ? Thecc1EG020446 Secondary Identifier:  ? PAC:27456058
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020446 0.5kb upstream 0.5kb upstream 4542 true scaffold_4: 28606737-28611278 Theobroma cacao
Thecc1EG020446 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 28610779-28611278 Theobroma cacao
Thecc1EG020446 0.5kb downstream 0.5kb downstream 4542 true scaffold_4: 28606237-28610778 Theobroma cacao
Thecc1EG020446 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 28606237-28606736 Theobroma cacao
Thecc1EG020446 1.0kb upstream 1.0kb upstream 5042 true scaffold_4: 28606737-28611778 Theobroma cacao
Thecc1EG020446 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 28610779-28611778 Theobroma cacao
Thecc1EG020446 1.0kb downstream 1.0kb downstream 5042 true scaffold_4: 28605737-28610778 Theobroma cacao
Thecc1EG020446 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 28605737-28606736 Theobroma cacao
Thecc1EG020446 2.0kb upstream 2.0kb upstream 6042 true scaffold_4: 28606737-28612778 Theobroma cacao
Thecc1EG020446 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 28610779-28612778 Theobroma cacao
Thecc1EG020446 2.0kb downstream 2.0kb downstream 6042 true scaffold_4: 28604737-28610778 Theobroma cacao
Thecc1EG020446 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 28604737-28606736 Theobroma cacao
Thecc1EG020446 5.0kb upstream 5.0kb upstream 9042 true scaffold_4: 28606737-28615778 Theobroma cacao
Thecc1EG020446 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 28610779-28615778 Theobroma cacao
Thecc1EG020446 5.0kb downstream 5.0kb downstream 9042 true scaffold_4: 28601737-28610778 Theobroma cacao
Thecc1EG020446 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 28601737-28606736 Theobroma cacao
Thecc1EG020446 10.0kb upstream 10.0kb upstream 14042 true scaffold_4: 28606737-28620778 Theobroma cacao
Thecc1EG020446 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 28610779-28620778 Theobroma cacao
Thecc1EG020446 10.0kb downstream 10.0kb downstream 14042 true scaffold_4: 28596737-28610778 Theobroma cacao
Thecc1EG020446 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 28596737-28606736 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829478 5264 Brassicales-Malvales View MSA
124344168 5266 SBM View MSA
124238868 5268 Malvidae View MSA
124065893 5270 Rosid View MSA
123737937 5271 Pentapetalae View MSA
122790266 5272 Eudicot View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain