Gene : Thecc1EG020411 T. cacao v1.1
Defline:  (1 of 12) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) Genomic Order:  2161
Name:  ? Thecc1EG020411 Secondary Identifier:  ? PAC:27453648
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020411 0.5kb upstream 0.5kb upstream 1297 true scaffold_4: 28447297-28448593 Theobroma cacao
Thecc1EG020411 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 28447297-28447796 Theobroma cacao
Thecc1EG020411 0.5kb downstream 0.5kb downstream 1297 true scaffold_4: 28447797-28449093 Theobroma cacao
Thecc1EG020411 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 28448594-28449093 Theobroma cacao
Thecc1EG020411 1.0kb upstream 1.0kb upstream 1797 true scaffold_4: 28446797-28448593 Theobroma cacao
Thecc1EG020411 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 28446797-28447796 Theobroma cacao
Thecc1EG020411 1.0kb downstream 1.0kb downstream 1797 true scaffold_4: 28447797-28449593 Theobroma cacao
Thecc1EG020411 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 28448594-28449593 Theobroma cacao
Thecc1EG020411 2.0kb upstream 2.0kb upstream 2797 true scaffold_4: 28445797-28448593 Theobroma cacao
Thecc1EG020411 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 28445797-28447796 Theobroma cacao
Thecc1EG020411 2.0kb downstream 2.0kb downstream 2797 true scaffold_4: 28447797-28450593 Theobroma cacao
Thecc1EG020411 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 28448594-28450593 Theobroma cacao
Thecc1EG020411 5.0kb upstream 5.0kb upstream 5797 true scaffold_4: 28442797-28448593 Theobroma cacao
Thecc1EG020411 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 28442797-28447796 Theobroma cacao
Thecc1EG020411 5.0kb downstream 5.0kb downstream 5797 true scaffold_4: 28447797-28453593 Theobroma cacao
Thecc1EG020411 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 28448594-28453593 Theobroma cacao
Thecc1EG020411 10.0kb upstream 10.0kb upstream 10797 true scaffold_4: 28437797-28448593 Theobroma cacao
Thecc1EG020411 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 28437797-28447796 Theobroma cacao
Thecc1EG020411 10.0kb downstream 10.0kb downstream 10797 true scaffold_4: 28447797-28458593 Theobroma cacao
Thecc1EG020411 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 28448594-28458593 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841666 5264 Brassicales-Malvales View MSA
124341809 5266 SBM View MSA
124253811 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain