Gene : Thecc1EG020387 T. cacao v1.1
Defline:  (1 of 2) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Genomic Order:  2140
Name:  ? Thecc1EG020387 Secondary Identifier:  ? PAC:27455438
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5136 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-6435 Theobroma cacao pathologic  
Tcacao PWY-735 Theobroma cacao pathologic  
Tcacao PWY-7606 Theobroma cacao pathologic  
Tcacao PWY-7726 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020387 0.5kb upstream 0.5kb upstream 5098 true scaffold_4: 28300034-28305131 Theobroma cacao
Thecc1EG020387 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 28304632-28305131 Theobroma cacao
Thecc1EG020387 0.5kb downstream 0.5kb downstream 5098 true scaffold_4: 28299534-28304631 Theobroma cacao
Thecc1EG020387 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 28299534-28300033 Theobroma cacao
Thecc1EG020387 1.0kb upstream 1.0kb upstream 5598 true scaffold_4: 28300034-28305631 Theobroma cacao
Thecc1EG020387 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 28304632-28305631 Theobroma cacao
Thecc1EG020387 1.0kb downstream 1.0kb downstream 5598 true scaffold_4: 28299034-28304631 Theobroma cacao
Thecc1EG020387 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 28299034-28300033 Theobroma cacao
Thecc1EG020387 2.0kb upstream 2.0kb upstream 6598 true scaffold_4: 28300034-28306631 Theobroma cacao
Thecc1EG020387 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 28304632-28306631 Theobroma cacao
Thecc1EG020387 2.0kb downstream 2.0kb downstream 6598 true scaffold_4: 28298034-28304631 Theobroma cacao
Thecc1EG020387 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 28298034-28300033 Theobroma cacao
Thecc1EG020387 5.0kb upstream 5.0kb upstream 9598 true scaffold_4: 28300034-28309631 Theobroma cacao
Thecc1EG020387 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 28304632-28309631 Theobroma cacao
Thecc1EG020387 5.0kb downstream 5.0kb downstream 9598 true scaffold_4: 28295034-28304631 Theobroma cacao
Thecc1EG020387 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 28295034-28300033 Theobroma cacao
Thecc1EG020387 10.0kb upstream 10.0kb upstream 14598 true scaffold_4: 28300034-28314631 Theobroma cacao
Thecc1EG020387 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 28304632-28314631 Theobroma cacao
Thecc1EG020387 10.0kb downstream 10.0kb downstream 14598 true scaffold_4: 28290034-28304631 Theobroma cacao
Thecc1EG020387 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 28290034-28300033 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828476 5264 Brassicales-Malvales View MSA
124344876 5266 SBM View MSA
124242182 5268 Malvidae View MSA
124065110 5270 Rosid View MSA
123750766 5271 Pentapetalae View MSA
122786071 5272 Eudicot View MSA
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain