Gene : Thecc1EG020385 T. cacao v1.1
Defline:  (1 of 1) K01687 - dihydroxy-acid dehydratase (ilvD) Genomic Order:  2138
Name:  ? Thecc1EG020385 Secondary Identifier:  ? PAC:27451746
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao BRANCHED-CHAIN-AA-SYN-PWY Theobroma cacao pathologic  
Tcacao ILEUSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3001 Theobroma cacao pathologic  
Tcacao VALSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020385 0.5kb upstream 0.5kb upstream 8061 true scaffold_4: 28283797-28291857 Theobroma cacao
Thecc1EG020385 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 28283797-28284296 Theobroma cacao
Thecc1EG020385 0.5kb downstream 0.5kb downstream 8061 true scaffold_4: 28284297-28292357 Theobroma cacao
Thecc1EG020385 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 28291858-28292357 Theobroma cacao
Thecc1EG020385 1.0kb upstream 1.0kb upstream 8561 true scaffold_4: 28283297-28291857 Theobroma cacao
Thecc1EG020385 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 28283297-28284296 Theobroma cacao
Thecc1EG020385 1.0kb downstream 1.0kb downstream 8561 true scaffold_4: 28284297-28292857 Theobroma cacao
Thecc1EG020385 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 28291858-28292857 Theobroma cacao
Thecc1EG020385 2.0kb upstream 2.0kb upstream 9561 true scaffold_4: 28282297-28291857 Theobroma cacao
Thecc1EG020385 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 28282297-28284296 Theobroma cacao
Thecc1EG020385 2.0kb downstream 2.0kb downstream 9561 true scaffold_4: 28284297-28293857 Theobroma cacao
Thecc1EG020385 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 28291858-28293857 Theobroma cacao
Thecc1EG020385 5.0kb upstream 5.0kb upstream 12561 true scaffold_4: 28279297-28291857 Theobroma cacao
Thecc1EG020385 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 28279297-28284296 Theobroma cacao
Thecc1EG020385 5.0kb downstream 5.0kb downstream 12561 true scaffold_4: 28284297-28296857 Theobroma cacao
Thecc1EG020385 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 28291858-28296857 Theobroma cacao
Thecc1EG020385 10.0kb upstream 10.0kb upstream 17561 true scaffold_4: 28274297-28291857 Theobroma cacao
Thecc1EG020385 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 28274297-28284296 Theobroma cacao
Thecc1EG020385 10.0kb downstream 10.0kb downstream 17561 true scaffold_4: 28284297-28301857 Theobroma cacao
Thecc1EG020385 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 28291858-28301857 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828725 5264 Brassicales-Malvales View MSA
124341291 5266 SBM View MSA
124241984 5268 Malvidae View MSA
124066376 5270 Rosid View MSA
123742145 5271 Pentapetalae View MSA
122787783 5272 Eudicot View MSA
122041651 5273 Angiosperm View MSA
121345047 5274 Embryophyte View MSA
123424997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain