Gene : Thecc1EG020335 T. cacao v1.1
Defline:  (1 of 2) K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Genomic Order:  2093
Name:  ? Thecc1EG020335 Secondary Identifier:  ? PAC:27454087
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020335 0.5kb upstream 0.5kb upstream 2672 true scaffold_4: 27993798-27996469 Theobroma cacao
Thecc1EG020335 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27995970-27996469 Theobroma cacao
Thecc1EG020335 0.5kb downstream 0.5kb downstream 2672 true scaffold_4: 27993298-27995969 Theobroma cacao
Thecc1EG020335 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27993298-27993797 Theobroma cacao
Thecc1EG020335 1.0kb upstream 1.0kb upstream 3172 true scaffold_4: 27993798-27996969 Theobroma cacao
Thecc1EG020335 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27995970-27996969 Theobroma cacao
Thecc1EG020335 1.0kb downstream 1.0kb downstream 3172 true scaffold_4: 27992798-27995969 Theobroma cacao
Thecc1EG020335 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27992798-27993797 Theobroma cacao
Thecc1EG020335 2.0kb upstream 2.0kb upstream 4172 true scaffold_4: 27993798-27997969 Theobroma cacao
Thecc1EG020335 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27995970-27997969 Theobroma cacao
Thecc1EG020335 2.0kb downstream 2.0kb downstream 4172 true scaffold_4: 27991798-27995969 Theobroma cacao
Thecc1EG020335 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27991798-27993797 Theobroma cacao
Thecc1EG020335 5.0kb upstream 5.0kb upstream 7172 true scaffold_4: 27993798-28000969 Theobroma cacao
Thecc1EG020335 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27995970-28000969 Theobroma cacao
Thecc1EG020335 5.0kb downstream 5.0kb downstream 7172 true scaffold_4: 27988798-27995969 Theobroma cacao
Thecc1EG020335 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27988798-27993797 Theobroma cacao
Thecc1EG020335 10.0kb upstream 10.0kb upstream 12172 true scaffold_4: 27993798-28005969 Theobroma cacao
Thecc1EG020335 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27995970-28005969 Theobroma cacao
Thecc1EG020335 10.0kb downstream 10.0kb downstream 12172 true scaffold_4: 27983798-27995969 Theobroma cacao
Thecc1EG020335 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27983798-27993797 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840990 5264 Brassicales-Malvales View MSA
124348862 5266 SBM View MSA
124247090 5268 Malvidae View MSA
124069577 5270 Rosid View MSA
123745483 5271 Pentapetalae View MSA
122796740 5272 Eudicot View MSA
122042126 5273 Angiosperm View MSA
121343862 5274 Embryophyte View MSA
123428218 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain