Gene : Thecc1EG020344 T. cacao v1.1
Defline:  (1 of 2) PTHR15898//PTHR15898:SF1 - UNCHARACTERIZED // GLUCOSE-INDUCED DEGRADATION PROTEIN 4 HOMOLOG Genomic Order:  2100
Name:  ? Thecc1EG020344 Secondary Identifier:  ? PAC:27451693
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020344 0.5kb upstream 0.5kb upstream 5717 true scaffold_4: 28062193-28067909 Theobroma cacao
Thecc1EG020344 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 28067410-28067909 Theobroma cacao
Thecc1EG020344 0.5kb downstream 0.5kb downstream 5717 true scaffold_4: 28061693-28067409 Theobroma cacao
Thecc1EG020344 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 28061693-28062192 Theobroma cacao
Thecc1EG020344 1.0kb upstream 1.0kb upstream 6217 true scaffold_4: 28062193-28068409 Theobroma cacao
Thecc1EG020344 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 28067410-28068409 Theobroma cacao
Thecc1EG020344 1.0kb downstream 1.0kb downstream 6217 true scaffold_4: 28061193-28067409 Theobroma cacao
Thecc1EG020344 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 28061193-28062192 Theobroma cacao
Thecc1EG020344 2.0kb upstream 2.0kb upstream 7217 true scaffold_4: 28062193-28069409 Theobroma cacao
Thecc1EG020344 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 28067410-28069409 Theobroma cacao
Thecc1EG020344 2.0kb downstream 2.0kb downstream 7217 true scaffold_4: 28060193-28067409 Theobroma cacao
Thecc1EG020344 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 28060193-28062192 Theobroma cacao
Thecc1EG020344 5.0kb upstream 5.0kb upstream 10217 true scaffold_4: 28062193-28072409 Theobroma cacao
Thecc1EG020344 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 28067410-28072409 Theobroma cacao
Thecc1EG020344 5.0kb downstream 5.0kb downstream 10217 true scaffold_4: 28057193-28067409 Theobroma cacao
Thecc1EG020344 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 28057193-28062192 Theobroma cacao
Thecc1EG020344 10.0kb upstream 10.0kb upstream 15217 true scaffold_4: 28062193-28077409 Theobroma cacao
Thecc1EG020344 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 28067410-28077409 Theobroma cacao
Thecc1EG020344 10.0kb downstream 10.0kb downstream 15217 true scaffold_4: 28052193-28067409 Theobroma cacao
Thecc1EG020344 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 28052193-28062192 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836090 5264 Brassicales-Malvales View MSA
124350084 5266 SBM View MSA
124245890 5268 Malvidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain