Gene : Thecc1EG020308 T. cacao v1.1
Defline:  (1 of 8) K13947 - auxin efflux carrier family (PIN) Genomic Order:  2069
Name:  ? Thecc1EG020308 Secondary Identifier:  ? PAC:27452245
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020308 0.5kb upstream 0.5kb upstream 3050 true scaffold_4: 27809852-27812901 Theobroma cacao
Thecc1EG020308 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27812402-27812901 Theobroma cacao
Thecc1EG020308 0.5kb downstream 0.5kb downstream 3050 true scaffold_4: 27809352-27812401 Theobroma cacao
Thecc1EG020308 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27809352-27809851 Theobroma cacao
Thecc1EG020308 1.0kb upstream 1.0kb upstream 3550 true scaffold_4: 27809852-27813401 Theobroma cacao
Thecc1EG020308 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27812402-27813401 Theobroma cacao
Thecc1EG020308 1.0kb downstream 1.0kb downstream 3550 true scaffold_4: 27808852-27812401 Theobroma cacao
Thecc1EG020308 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27808852-27809851 Theobroma cacao
Thecc1EG020308 2.0kb upstream 2.0kb upstream 4550 true scaffold_4: 27809852-27814401 Theobroma cacao
Thecc1EG020308 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27812402-27814401 Theobroma cacao
Thecc1EG020308 2.0kb downstream 2.0kb downstream 4550 true scaffold_4: 27807852-27812401 Theobroma cacao
Thecc1EG020308 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27807852-27809851 Theobroma cacao
Thecc1EG020308 5.0kb upstream 5.0kb upstream 7550 true scaffold_4: 27809852-27817401 Theobroma cacao
Thecc1EG020308 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27812402-27817401 Theobroma cacao
Thecc1EG020308 5.0kb downstream 5.0kb downstream 7550 true scaffold_4: 27804852-27812401 Theobroma cacao
Thecc1EG020308 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27804852-27809851 Theobroma cacao
Thecc1EG020308 10.0kb upstream 10.0kb upstream 12550 true scaffold_4: 27809852-27822401 Theobroma cacao
Thecc1EG020308 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27812402-27822401 Theobroma cacao
Thecc1EG020308 10.0kb downstream 10.0kb downstream 12550 true scaffold_4: 27799852-27812401 Theobroma cacao
Thecc1EG020308 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27799852-27809851 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824406 5264 Brassicales-Malvales View MSA
124320178 5266 SBM View MSA
124248400 5268 Malvidae View MSA
124072125 5270 Rosid View MSA
123752153 5271 Pentapetalae View MSA
122793838 5272 Eudicot View MSA
122050632 5273 Angiosperm View MSA
121312040 5274 Embryophyte View MSA
123349252 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain