Gene : Thecc1EG020310 T. cacao v1.1
Defline:  (1 of 2) K01583 - arginine decarboxylase (E4.1.1.19) Genomic Order:  2071
Name:  ? Thecc1EG020310 Secondary Identifier:  ? PAC:27453328
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao POLYAMINSYN3-PWY Theobroma cacao pathologic  
Tcacao PWY-43 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020310 0.5kb upstream 0.5kb upstream 2971 true scaffold_4: 27819348-27822318 Theobroma cacao
Thecc1EG020310 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27821819-27822318 Theobroma cacao
Thecc1EG020310 0.5kb downstream 0.5kb downstream 2971 true scaffold_4: 27818848-27821818 Theobroma cacao
Thecc1EG020310 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27818848-27819347 Theobroma cacao
Thecc1EG020310 1.0kb upstream 1.0kb upstream 3471 true scaffold_4: 27819348-27822818 Theobroma cacao
Thecc1EG020310 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27821819-27822818 Theobroma cacao
Thecc1EG020310 1.0kb downstream 1.0kb downstream 3471 true scaffold_4: 27818348-27821818 Theobroma cacao
Thecc1EG020310 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27818348-27819347 Theobroma cacao
Thecc1EG020310 2.0kb upstream 2.0kb upstream 4471 true scaffold_4: 27819348-27823818 Theobroma cacao
Thecc1EG020310 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27821819-27823818 Theobroma cacao
Thecc1EG020310 2.0kb downstream 2.0kb downstream 4471 true scaffold_4: 27817348-27821818 Theobroma cacao
Thecc1EG020310 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27817348-27819347 Theobroma cacao
Thecc1EG020310 5.0kb upstream 5.0kb upstream 7471 true scaffold_4: 27819348-27826818 Theobroma cacao
Thecc1EG020310 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27821819-27826818 Theobroma cacao
Thecc1EG020310 5.0kb downstream 5.0kb downstream 7471 true scaffold_4: 27814348-27821818 Theobroma cacao
Thecc1EG020310 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27814348-27819347 Theobroma cacao
Thecc1EG020310 10.0kb upstream 10.0kb upstream 12471 true scaffold_4: 27819348-27831818 Theobroma cacao
Thecc1EG020310 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27821819-27831818 Theobroma cacao
Thecc1EG020310 10.0kb downstream 10.0kb downstream 12471 true scaffold_4: 27809348-27821818 Theobroma cacao
Thecc1EG020310 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27809348-27819347 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827460 5264 Brassicales-Malvales View MSA
124337522 5266 SBM View MSA
124242922 5268 Malvidae View MSA
124064588 5270 Rosid View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain