Gene : Thecc1EG020593 T. cacao v1.1
Defline:  (1 of 2) 2.5.1.79 - Thermospermine synthase Genomic Order:  2321
Name:  ? Thecc1EG020593 Secondary Identifier:  ? PAC:27454689
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020593 0.5kb upstream 0.5kb upstream 4176 true scaffold_4: 29315396-29319571 Theobroma cacao
Thecc1EG020593 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29319072-29319571 Theobroma cacao
Thecc1EG020593 0.5kb downstream 0.5kb downstream 4176 true scaffold_4: 29314896-29319071 Theobroma cacao
Thecc1EG020593 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29314896-29315395 Theobroma cacao
Thecc1EG020593 1.0kb upstream 1.0kb upstream 4676 true scaffold_4: 29315396-29320071 Theobroma cacao
Thecc1EG020593 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29319072-29320071 Theobroma cacao
Thecc1EG020593 1.0kb downstream 1.0kb downstream 4676 true scaffold_4: 29314396-29319071 Theobroma cacao
Thecc1EG020593 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29314396-29315395 Theobroma cacao
Thecc1EG020593 2.0kb upstream 2.0kb upstream 5676 true scaffold_4: 29315396-29321071 Theobroma cacao
Thecc1EG020593 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29319072-29321071 Theobroma cacao
Thecc1EG020593 2.0kb downstream 2.0kb downstream 5676 true scaffold_4: 29313396-29319071 Theobroma cacao
Thecc1EG020593 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29313396-29315395 Theobroma cacao
Thecc1EG020593 5.0kb upstream 5.0kb upstream 8676 true scaffold_4: 29315396-29324071 Theobroma cacao
Thecc1EG020593 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29319072-29324071 Theobroma cacao
Thecc1EG020593 5.0kb downstream 5.0kb downstream 8676 true scaffold_4: 29310396-29319071 Theobroma cacao
Thecc1EG020593 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29310396-29315395 Theobroma cacao
Thecc1EG020593 10.0kb upstream 10.0kb upstream 13676 true scaffold_4: 29315396-29329071 Theobroma cacao
Thecc1EG020593 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29319072-29329071 Theobroma cacao
Thecc1EG020593 10.0kb downstream 10.0kb downstream 13676 true scaffold_4: 29305396-29319071 Theobroma cacao
Thecc1EG020593 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29305396-29315395 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819480 5264 Brassicales-Malvales Singleton cluster - no MSA
124348325 5266 SBM View MSA
124245921 5268 Malvidae View MSA
124069905 5270 Rosid View MSA
123748388 5271 Pentapetalae View MSA
122794179 5272 Eudicot View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain