Gene : Thecc1EG020585 T. cacao v1.1
Defline:  (1 of 1) PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Genomic Order:  2313
Name:  ? Thecc1EG020585 Secondary Identifier:  ? PAC:27452767
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020585 0.5kb upstream 0.5kb upstream 14230 true scaffold_4: 29253879-29268108 Theobroma cacao
Thecc1EG020585 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29253879-29254378 Theobroma cacao
Thecc1EG020585 0.5kb downstream 0.5kb downstream 14230 true scaffold_4: 29254379-29268608 Theobroma cacao
Thecc1EG020585 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29268109-29268608 Theobroma cacao
Thecc1EG020585 1.0kb upstream 1.0kb upstream 14730 true scaffold_4: 29253379-29268108 Theobroma cacao
Thecc1EG020585 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29253379-29254378 Theobroma cacao
Thecc1EG020585 1.0kb downstream 1.0kb downstream 14730 true scaffold_4: 29254379-29269108 Theobroma cacao
Thecc1EG020585 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29268109-29269108 Theobroma cacao
Thecc1EG020585 2.0kb upstream 2.0kb upstream 15730 true scaffold_4: 29252379-29268108 Theobroma cacao
Thecc1EG020585 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29252379-29254378 Theobroma cacao
Thecc1EG020585 2.0kb downstream 2.0kb downstream 15730 true scaffold_4: 29254379-29270108 Theobroma cacao
Thecc1EG020585 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29268109-29270108 Theobroma cacao
Thecc1EG020585 5.0kb upstream 5.0kb upstream 18730 true scaffold_4: 29249379-29268108 Theobroma cacao
Thecc1EG020585 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29249379-29254378 Theobroma cacao
Thecc1EG020585 5.0kb downstream 5.0kb downstream 18730 true scaffold_4: 29254379-29273108 Theobroma cacao
Thecc1EG020585 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29268109-29273108 Theobroma cacao
Thecc1EG020585 10.0kb upstream 10.0kb upstream 23730 true scaffold_4: 29244379-29268108 Theobroma cacao
Thecc1EG020585 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29244379-29254378 Theobroma cacao
Thecc1EG020585 10.0kb downstream 10.0kb downstream 23730 true scaffold_4: 29254379-29278108 Theobroma cacao
Thecc1EG020585 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29268109-29278108 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838389 5264 Brassicales-Malvales View MSA
124343026 5266 SBM View MSA
124242340 5268 Malvidae View MSA
124068885 5270 Rosid View MSA
123740436 5271 Pentapetalae View MSA
122788537 5272 Eudicot View MSA
122049796 5273 Angiosperm View MSA
121350697 5274 Embryophyte View MSA
123381850 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain