Gene : Thecc1EG020580 T. cacao v1.1

Defline:  (1 of 1) PTHR11689:SF92 - H(+)/CL(-) EXCHANGE TRANSPORTER 7 Genomic Order:  2307
Name:  ? Thecc1EG020580 Secondary Identifier:  ? PAC:27454980

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020580 0.5kb upstream 0.5kb upstream 9791 true scaffold_4: 29217609-29227399 Theobroma cacao
Thecc1EG020580 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29217609-29218108 Theobroma cacao
Thecc1EG020580 0.5kb downstream 0.5kb downstream 9791 true scaffold_4: 29218109-29227899 Theobroma cacao
Thecc1EG020580 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29227400-29227899 Theobroma cacao
Thecc1EG020580 1.0kb upstream 1.0kb upstream 10291 true scaffold_4: 29217109-29227399 Theobroma cacao
Thecc1EG020580 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29217109-29218108 Theobroma cacao
Thecc1EG020580 1.0kb downstream 1.0kb downstream 10291 true scaffold_4: 29218109-29228399 Theobroma cacao
Thecc1EG020580 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29227400-29228399 Theobroma cacao
Thecc1EG020580 2.0kb upstream 2.0kb upstream 11291 true scaffold_4: 29216109-29227399 Theobroma cacao
Thecc1EG020580 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29216109-29218108 Theobroma cacao
Thecc1EG020580 2.0kb downstream 2.0kb downstream 11291 true scaffold_4: 29218109-29229399 Theobroma cacao
Thecc1EG020580 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29227400-29229399 Theobroma cacao
Thecc1EG020580 5.0kb upstream 5.0kb upstream 14291 true scaffold_4: 29213109-29227399 Theobroma cacao
Thecc1EG020580 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29213109-29218108 Theobroma cacao
Thecc1EG020580 5.0kb downstream 5.0kb downstream 14291 true scaffold_4: 29218109-29232399 Theobroma cacao
Thecc1EG020580 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29227400-29232399 Theobroma cacao
Thecc1EG020580 10.0kb upstream 10.0kb upstream 19291 true scaffold_4: 29208109-29227399 Theobroma cacao
Thecc1EG020580 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29208109-29218108 Theobroma cacao
Thecc1EG020580 10.0kb downstream 10.0kb downstream 19291 true scaffold_4: 29218109-29237399 Theobroma cacao
Thecc1EG020580 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29227400-29237399 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835853 5264 Brassicales-Malvales View MSA
124339935 5266 SBM View MSA
124241721 5268 Malvidae View MSA
124065462 5270 Rosid View MSA
123737450 5271 Pentapetalae View MSA
122788827 5272 Eudicot View MSA
122044334 5273 Angiosperm View MSA
121347393 5274 Embryophyte View MSA
123428433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain