Gene : Thecc1EG020540 T. cacao v1.1
Defline:  (1 of 2) PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Genomic Order:  2274
Name:  ? Thecc1EG020540 Secondary Identifier:  ? PAC:27451868
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020540 0.5kb upstream 0.5kb upstream 5360 true scaffold_4: 29023334-29028693 Theobroma cacao
Thecc1EG020540 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29023334-29023833 Theobroma cacao
Thecc1EG020540 0.5kb downstream 0.5kb downstream 5360 true scaffold_4: 29023834-29029193 Theobroma cacao
Thecc1EG020540 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29028694-29029193 Theobroma cacao
Thecc1EG020540 1.0kb upstream 1.0kb upstream 5860 true scaffold_4: 29022834-29028693 Theobroma cacao
Thecc1EG020540 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29022834-29023833 Theobroma cacao
Thecc1EG020540 1.0kb downstream 1.0kb downstream 5860 true scaffold_4: 29023834-29029693 Theobroma cacao
Thecc1EG020540 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29028694-29029693 Theobroma cacao
Thecc1EG020540 2.0kb upstream 2.0kb upstream 6860 true scaffold_4: 29021834-29028693 Theobroma cacao
Thecc1EG020540 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29021834-29023833 Theobroma cacao
Thecc1EG020540 2.0kb downstream 2.0kb downstream 6860 true scaffold_4: 29023834-29030693 Theobroma cacao
Thecc1EG020540 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29028694-29030693 Theobroma cacao
Thecc1EG020540 5.0kb upstream 5.0kb upstream 9860 true scaffold_4: 29018834-29028693 Theobroma cacao
Thecc1EG020540 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29018834-29023833 Theobroma cacao
Thecc1EG020540 5.0kb downstream 5.0kb downstream 9860 true scaffold_4: 29023834-29033693 Theobroma cacao
Thecc1EG020540 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29028694-29033693 Theobroma cacao
Thecc1EG020540 10.0kb upstream 10.0kb upstream 14860 true scaffold_4: 29013834-29028693 Theobroma cacao
Thecc1EG020540 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29013834-29023833 Theobroma cacao
Thecc1EG020540 10.0kb downstream 10.0kb downstream 14860 true scaffold_4: 29023834-29038693 Theobroma cacao
Thecc1EG020540 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29028694-29038693 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836941 5264 Brassicales-Malvales View MSA
124336553 5266 SBM View MSA
124239894 5268 Malvidae View MSA
124061759 5270 Rosid View MSA
123738358 5271 Pentapetalae View MSA
122797370 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain