Gene : Thecc1EG020786 T. cacao v1.1

Defline:  (1 of 1) PTHR31846//PTHR31846:SF13 - FAMILY NOT NAMED // CRM FAMILY MEMBER 3A-RELATED Genomic Order:  2485
Name:  ? Thecc1EG020786 Secondary Identifier:  ? PAC:27453538

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020786 0.5kb upstream 0.5kb upstream 6412 true scaffold_4: 30219723-30226134 Theobroma cacao
Thecc1EG020786 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30219723-30220222 Theobroma cacao
Thecc1EG020786 0.5kb downstream 0.5kb downstream 6412 true scaffold_4: 30220223-30226634 Theobroma cacao
Thecc1EG020786 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30226135-30226634 Theobroma cacao
Thecc1EG020786 1.0kb upstream 1.0kb upstream 6912 true scaffold_4: 30219223-30226134 Theobroma cacao
Thecc1EG020786 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30219223-30220222 Theobroma cacao
Thecc1EG020786 1.0kb downstream 1.0kb downstream 6912 true scaffold_4: 30220223-30227134 Theobroma cacao
Thecc1EG020786 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30226135-30227134 Theobroma cacao
Thecc1EG020786 2.0kb upstream 2.0kb upstream 7912 true scaffold_4: 30218223-30226134 Theobroma cacao
Thecc1EG020786 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30218223-30220222 Theobroma cacao
Thecc1EG020786 2.0kb downstream 2.0kb downstream 7912 true scaffold_4: 30220223-30228134 Theobroma cacao
Thecc1EG020786 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30226135-30228134 Theobroma cacao
Thecc1EG020786 5.0kb upstream 5.0kb upstream 10912 true scaffold_4: 30215223-30226134 Theobroma cacao
Thecc1EG020786 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30215223-30220222 Theobroma cacao
Thecc1EG020786 5.0kb downstream 5.0kb downstream 10912 true scaffold_4: 30220223-30231134 Theobroma cacao
Thecc1EG020786 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30226135-30231134 Theobroma cacao
Thecc1EG020786 10.0kb upstream 10.0kb upstream 15912 true scaffold_4: 30210223-30226134 Theobroma cacao
Thecc1EG020786 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30210223-30220222 Theobroma cacao
Thecc1EG020786 10.0kb downstream 10.0kb downstream 15912 true scaffold_4: 30220223-30236134 Theobroma cacao
Thecc1EG020786 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30226135-30236134 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831913 5264 Brassicales-Malvales View MSA
124337421 5266 SBM View MSA
124237901 5268 Malvidae View MSA
124062496 5270 Rosid View MSA
123746950 5271 Pentapetalae View MSA
122786803 5272 Eudicot View MSA
122043214 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain