Gene : Thecc1EG020774 T. cacao v1.1
Defline:  (1 of 1) PTHR31734:SF30 - AUXIN-RESPONSIVE PROTEIN IAA14-RELATED Genomic Order:  2475
Name:  ? Thecc1EG020774 Secondary Identifier:  ? PAC:27453284
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020774 0.5kb upstream 0.5kb upstream 3007 true scaffold_4: 30167173-30170179 Theobroma cacao
Thecc1EG020774 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30167173-30167672 Theobroma cacao
Thecc1EG020774 0.5kb downstream 0.5kb downstream 3007 true scaffold_4: 30167673-30170679 Theobroma cacao
Thecc1EG020774 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30170180-30170679 Theobroma cacao
Thecc1EG020774 1.0kb upstream 1.0kb upstream 3507 true scaffold_4: 30166673-30170179 Theobroma cacao
Thecc1EG020774 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30166673-30167672 Theobroma cacao
Thecc1EG020774 1.0kb downstream 1.0kb downstream 3507 true scaffold_4: 30167673-30171179 Theobroma cacao
Thecc1EG020774 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30170180-30171179 Theobroma cacao
Thecc1EG020774 2.0kb upstream 2.0kb upstream 4507 true scaffold_4: 30165673-30170179 Theobroma cacao
Thecc1EG020774 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30165673-30167672 Theobroma cacao
Thecc1EG020774 2.0kb downstream 2.0kb downstream 4507 true scaffold_4: 30167673-30172179 Theobroma cacao
Thecc1EG020774 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30170180-30172179 Theobroma cacao
Thecc1EG020774 5.0kb upstream 5.0kb upstream 7507 true scaffold_4: 30162673-30170179 Theobroma cacao
Thecc1EG020774 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30162673-30167672 Theobroma cacao
Thecc1EG020774 5.0kb downstream 5.0kb downstream 7507 true scaffold_4: 30167673-30175179 Theobroma cacao
Thecc1EG020774 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30170180-30175179 Theobroma cacao
Thecc1EG020774 10.0kb upstream 10.0kb upstream 12507 true scaffold_4: 30157673-30170179 Theobroma cacao
Thecc1EG020774 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30157673-30167672 Theobroma cacao
Thecc1EG020774 10.0kb downstream 10.0kb downstream 12507 true scaffold_4: 30167673-30180179 Theobroma cacao
Thecc1EG020774 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30170180-30180179 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840211 5264 Brassicales-Malvales View MSA
124349634 5266 SBM View MSA
124254131 5268 Malvidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain