Gene : Thecc1EG020784 T. cacao v1.1
Defline:  (1 of 57) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  2483
Name:  ? Thecc1EG020784 Secondary Identifier:  ? PAC:27455842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020784 0.5kb upstream 0.5kb upstream 3281 true scaffold_4: 30209791-30213071 Theobroma cacao
Thecc1EG020784 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30209791-30210290 Theobroma cacao
Thecc1EG020784 0.5kb downstream 0.5kb downstream 3281 true scaffold_4: 30210291-30213571 Theobroma cacao
Thecc1EG020784 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30213072-30213571 Theobroma cacao
Thecc1EG020784 1.0kb upstream 1.0kb upstream 3781 true scaffold_4: 30209291-30213071 Theobroma cacao
Thecc1EG020784 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30209291-30210290 Theobroma cacao
Thecc1EG020784 1.0kb downstream 1.0kb downstream 3781 true scaffold_4: 30210291-30214071 Theobroma cacao
Thecc1EG020784 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30213072-30214071 Theobroma cacao
Thecc1EG020784 2.0kb upstream 2.0kb upstream 4781 true scaffold_4: 30208291-30213071 Theobroma cacao
Thecc1EG020784 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30208291-30210290 Theobroma cacao
Thecc1EG020784 2.0kb downstream 2.0kb downstream 4781 true scaffold_4: 30210291-30215071 Theobroma cacao
Thecc1EG020784 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30213072-30215071 Theobroma cacao
Thecc1EG020784 5.0kb upstream 5.0kb upstream 7781 true scaffold_4: 30205291-30213071 Theobroma cacao
Thecc1EG020784 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30205291-30210290 Theobroma cacao
Thecc1EG020784 5.0kb downstream 5.0kb downstream 7781 true scaffold_4: 30210291-30218071 Theobroma cacao
Thecc1EG020784 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30213072-30218071 Theobroma cacao
Thecc1EG020784 10.0kb upstream 10.0kb upstream 12781 true scaffold_4: 30200291-30213071 Theobroma cacao
Thecc1EG020784 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30200291-30210290 Theobroma cacao
Thecc1EG020784 10.0kb downstream 10.0kb downstream 12781 true scaffold_4: 30210291-30223071 Theobroma cacao
Thecc1EG020784 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30213072-30223071 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839255 5264 Brassicales-Malvales View MSA
124351539 5266 SBM View MSA
124254584 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain