Gene : Thecc1EG020710 T. cacao v1.1
Defline:  (1 of 2) PTHR22811:SF31 - RE49489P Genomic Order:  2422
Name:  ? Thecc1EG020710 Secondary Identifier:  ? PAC:27455703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020710 0.5kb upstream 0.5kb upstream 3967 true scaffold_4: 29830817-29834783 Theobroma cacao
Thecc1EG020710 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29830817-29831316 Theobroma cacao
Thecc1EG020710 0.5kb downstream 0.5kb downstream 3967 true scaffold_4: 29831317-29835283 Theobroma cacao
Thecc1EG020710 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29834784-29835283 Theobroma cacao
Thecc1EG020710 1.0kb upstream 1.0kb upstream 4467 true scaffold_4: 29830317-29834783 Theobroma cacao
Thecc1EG020710 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29830317-29831316 Theobroma cacao
Thecc1EG020710 1.0kb downstream 1.0kb downstream 4467 true scaffold_4: 29831317-29835783 Theobroma cacao
Thecc1EG020710 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29834784-29835783 Theobroma cacao
Thecc1EG020710 2.0kb upstream 2.0kb upstream 5467 true scaffold_4: 29829317-29834783 Theobroma cacao
Thecc1EG020710 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29829317-29831316 Theobroma cacao
Thecc1EG020710 2.0kb downstream 2.0kb downstream 5467 true scaffold_4: 29831317-29836783 Theobroma cacao
Thecc1EG020710 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29834784-29836783 Theobroma cacao
Thecc1EG020710 5.0kb upstream 5.0kb upstream 8467 true scaffold_4: 29826317-29834783 Theobroma cacao
Thecc1EG020710 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29826317-29831316 Theobroma cacao
Thecc1EG020710 5.0kb downstream 5.0kb downstream 8467 true scaffold_4: 29831317-29839783 Theobroma cacao
Thecc1EG020710 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29834784-29839783 Theobroma cacao
Thecc1EG020710 10.0kb upstream 10.0kb upstream 13467 true scaffold_4: 29821317-29834783 Theobroma cacao
Thecc1EG020710 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29821317-29831316 Theobroma cacao
Thecc1EG020710 10.0kb downstream 10.0kb downstream 13467 true scaffold_4: 29831317-29844783 Theobroma cacao
Thecc1EG020710 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29834784-29844783 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839760 5264 Brassicales-Malvales View MSA
124343285 5266 SBM View MSA
124251356 5268 Malvidae View MSA
124066384 5270 Rosid View MSA
123737785 5271 Pentapetalae View MSA
122791427 5272 Eudicot View MSA
122044870 5273 Angiosperm View MSA
121348336 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain