Gene : Thecc1EG020698 T. cacao v1.1
Defline:  (1 of 1) PTHR23418//PTHR23418:SF4 - ACIREDUCTONE DIOXYGENASE // 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4 Genomic Order:  2411
Name:  ? Thecc1EG020698 Secondary Identifier:  ? PAC:27452919
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4361 Theobroma cacao pathologic  
Tcacao PWY-7270 Theobroma cacao pathologic  
Tcacao PWY-7528 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020698 0.5kb upstream 0.5kb upstream 2165 true scaffold_4: 29796825-29798989 Theobroma cacao
Thecc1EG020698 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29796825-29797324 Theobroma cacao
Thecc1EG020698 0.5kb downstream 0.5kb downstream 2165 true scaffold_4: 29797325-29799489 Theobroma cacao
Thecc1EG020698 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29798990-29799489 Theobroma cacao
Thecc1EG020698 1.0kb upstream 1.0kb upstream 2665 true scaffold_4: 29796325-29798989 Theobroma cacao
Thecc1EG020698 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29796325-29797324 Theobroma cacao
Thecc1EG020698 1.0kb downstream 1.0kb downstream 2665 true scaffold_4: 29797325-29799989 Theobroma cacao
Thecc1EG020698 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29798990-29799989 Theobroma cacao
Thecc1EG020698 2.0kb upstream 2.0kb upstream 3665 true scaffold_4: 29795325-29798989 Theobroma cacao
Thecc1EG020698 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29795325-29797324 Theobroma cacao
Thecc1EG020698 2.0kb downstream 2.0kb downstream 3665 true scaffold_4: 29797325-29800989 Theobroma cacao
Thecc1EG020698 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29798990-29800989 Theobroma cacao
Thecc1EG020698 5.0kb upstream 5.0kb upstream 6665 true scaffold_4: 29792325-29798989 Theobroma cacao
Thecc1EG020698 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29792325-29797324 Theobroma cacao
Thecc1EG020698 5.0kb downstream 5.0kb downstream 6665 true scaffold_4: 29797325-29803989 Theobroma cacao
Thecc1EG020698 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29798990-29803989 Theobroma cacao
Thecc1EG020698 10.0kb upstream 10.0kb upstream 11665 true scaffold_4: 29787325-29798989 Theobroma cacao
Thecc1EG020698 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29787325-29797324 Theobroma cacao
Thecc1EG020698 10.0kb downstream 10.0kb downstream 11665 true scaffold_4: 29797325-29808989 Theobroma cacao
Thecc1EG020698 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29798990-29808989 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834672 5264 Brassicales-Malvales View MSA
124342820 5266 SBM View MSA
124240096 5268 Malvidae View MSA
124070684 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain