Gene : Thecc1EG020680 T. cacao v1.1
Defline:  (1 of 2) K02984 - small subunit ribosomal protein S3Ae (RP-S3Ae, RPS3A) Genomic Order:  2395
Name:  ? Thecc1EG020680 Secondary Identifier:  ? PAC:27455492
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020680 0.5kb upstream 0.5kb upstream 3084 true scaffold_4: 29711026-29714109 Theobroma cacao
Thecc1EG020680 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29713610-29714109 Theobroma cacao
Thecc1EG020680 0.5kb downstream 0.5kb downstream 3084 true scaffold_4: 29710526-29713609 Theobroma cacao
Thecc1EG020680 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29710526-29711025 Theobroma cacao
Thecc1EG020680 1.0kb upstream 1.0kb upstream 3584 true scaffold_4: 29711026-29714609 Theobroma cacao
Thecc1EG020680 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29713610-29714609 Theobroma cacao
Thecc1EG020680 1.0kb downstream 1.0kb downstream 3584 true scaffold_4: 29710026-29713609 Theobroma cacao
Thecc1EG020680 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29710026-29711025 Theobroma cacao
Thecc1EG020680 2.0kb upstream 2.0kb upstream 4584 true scaffold_4: 29711026-29715609 Theobroma cacao
Thecc1EG020680 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29713610-29715609 Theobroma cacao
Thecc1EG020680 2.0kb downstream 2.0kb downstream 4584 true scaffold_4: 29709026-29713609 Theobroma cacao
Thecc1EG020680 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29709026-29711025 Theobroma cacao
Thecc1EG020680 5.0kb upstream 5.0kb upstream 7584 true scaffold_4: 29711026-29718609 Theobroma cacao
Thecc1EG020680 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29713610-29718609 Theobroma cacao
Thecc1EG020680 5.0kb downstream 5.0kb downstream 7584 true scaffold_4: 29706026-29713609 Theobroma cacao
Thecc1EG020680 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29706026-29711025 Theobroma cacao
Thecc1EG020680 10.0kb upstream 10.0kb upstream 12584 true scaffold_4: 29711026-29723609 Theobroma cacao
Thecc1EG020680 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29713610-29723609 Theobroma cacao
Thecc1EG020680 10.0kb downstream 10.0kb downstream 12584 true scaffold_4: 29701026-29713609 Theobroma cacao
Thecc1EG020680 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29701026-29711025 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837466 5264 Brassicales-Malvales View MSA
124347427 5266 SBM View MSA
124244111 5268 Malvidae View MSA
124066895 5270 Rosid View MSA
123743383 5271 Pentapetalae View MSA
122787922 5272 Eudicot View MSA
122049456 5273 Angiosperm View MSA
121347467 5274 Embryophyte View MSA
123424177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain