Gene : Thecc1EG020681 T. cacao v1.1
Defline:  (1 of 340) PF08263 - Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  2396
Name:  ? Thecc1EG020681 Secondary Identifier:  ? PAC:27452044
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020681 0.5kb upstream 0.5kb upstream 2036 true scaffold_4: 29714997-29717032 Theobroma cacao
Thecc1EG020681 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29716533-29717032 Theobroma cacao
Thecc1EG020681 0.5kb downstream 0.5kb downstream 2036 true scaffold_4: 29714497-29716532 Theobroma cacao
Thecc1EG020681 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29714497-29714996 Theobroma cacao
Thecc1EG020681 1.0kb upstream 1.0kb upstream 2536 true scaffold_4: 29714997-29717532 Theobroma cacao
Thecc1EG020681 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29716533-29717532 Theobroma cacao
Thecc1EG020681 1.0kb downstream 1.0kb downstream 2536 true scaffold_4: 29713997-29716532 Theobroma cacao
Thecc1EG020681 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29713997-29714996 Theobroma cacao
Thecc1EG020681 2.0kb upstream 2.0kb upstream 3536 true scaffold_4: 29714997-29718532 Theobroma cacao
Thecc1EG020681 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29716533-29718532 Theobroma cacao
Thecc1EG020681 2.0kb downstream 2.0kb downstream 3536 true scaffold_4: 29712997-29716532 Theobroma cacao
Thecc1EG020681 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29712997-29714996 Theobroma cacao
Thecc1EG020681 5.0kb upstream 5.0kb upstream 6536 true scaffold_4: 29714997-29721532 Theobroma cacao
Thecc1EG020681 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29716533-29721532 Theobroma cacao
Thecc1EG020681 5.0kb downstream 5.0kb downstream 6536 true scaffold_4: 29709997-29716532 Theobroma cacao
Thecc1EG020681 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29709997-29714996 Theobroma cacao
Thecc1EG020681 10.0kb upstream 10.0kb upstream 11536 true scaffold_4: 29714997-29726532 Theobroma cacao
Thecc1EG020681 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29716533-29726532 Theobroma cacao
Thecc1EG020681 10.0kb downstream 10.0kb downstream 11536 true scaffold_4: 29704997-29716532 Theobroma cacao
Thecc1EG020681 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29704997-29714996 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841348 5264 Brassicales-Malvales View MSA
124350581 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain