Gene : Thecc1EG020620 T. cacao v1.1
Defline:  (1 of 3) PF07466 - Protein of unknown function (DUF1517) (DUF1517) Genomic Order:  2342
Name:  ? Thecc1EG020620 Secondary Identifier:  ? PAC:27452203
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020620 0.5kb upstream 0.5kb upstream 3748 true scaffold_4: 29457672-29461419 Theobroma cacao
Thecc1EG020620 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29460920-29461419 Theobroma cacao
Thecc1EG020620 0.5kb downstream 0.5kb downstream 3748 true scaffold_4: 29457172-29460919 Theobroma cacao
Thecc1EG020620 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29457172-29457671 Theobroma cacao
Thecc1EG020620 1.0kb upstream 1.0kb upstream 4248 true scaffold_4: 29457672-29461919 Theobroma cacao
Thecc1EG020620 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29460920-29461919 Theobroma cacao
Thecc1EG020620 1.0kb downstream 1.0kb downstream 4248 true scaffold_4: 29456672-29460919 Theobroma cacao
Thecc1EG020620 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29456672-29457671 Theobroma cacao
Thecc1EG020620 2.0kb upstream 2.0kb upstream 5248 true scaffold_4: 29457672-29462919 Theobroma cacao
Thecc1EG020620 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29460920-29462919 Theobroma cacao
Thecc1EG020620 2.0kb downstream 2.0kb downstream 5248 true scaffold_4: 29455672-29460919 Theobroma cacao
Thecc1EG020620 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29455672-29457671 Theobroma cacao
Thecc1EG020620 5.0kb upstream 5.0kb upstream 8248 true scaffold_4: 29457672-29465919 Theobroma cacao
Thecc1EG020620 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29460920-29465919 Theobroma cacao
Thecc1EG020620 5.0kb downstream 5.0kb downstream 8248 true scaffold_4: 29452672-29460919 Theobroma cacao
Thecc1EG020620 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29452672-29457671 Theobroma cacao
Thecc1EG020620 10.0kb upstream 10.0kb upstream 13248 true scaffold_4: 29457672-29470919 Theobroma cacao
Thecc1EG020620 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29460920-29470919 Theobroma cacao
Thecc1EG020620 10.0kb downstream 10.0kb downstream 13248 true scaffold_4: 29447672-29460919 Theobroma cacao
Thecc1EG020620 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29447672-29457671 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818982 5264 Brassicales-Malvales Singleton cluster - no MSA
124315266 5266 SBM Singleton cluster - no MSA
124253956 5268 Malvidae View MSA
123952877 5270 Rosid View MSA
123753168 5271 Pentapetalae View MSA
122797906 5272 Eudicot View MSA
122042227 5273 Angiosperm View MSA
123429152 5275 Viridiplantae View MSA
121348826 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain