Gene : Thecc1EG020965 T. cacao v1.1

Defline:  (1 of 7) K14411 - RNA-binding protein Musashi (MSI) Genomic Order:  2640
Name:  ? Thecc1EG020965 Secondary Identifier:  ? PAC:27454914

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020965 0.5kb upstream 0.5kb upstream 4318 true scaffold_4: 31119808-31124125 Theobroma cacao
Thecc1EG020965 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31123626-31124125 Theobroma cacao
Thecc1EG020965 0.5kb downstream 0.5kb downstream 4318 true scaffold_4: 31119308-31123625 Theobroma cacao
Thecc1EG020965 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31119308-31119807 Theobroma cacao
Thecc1EG020965 1.0kb upstream 1.0kb upstream 4818 true scaffold_4: 31119808-31124625 Theobroma cacao
Thecc1EG020965 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31123626-31124625 Theobroma cacao
Thecc1EG020965 1.0kb downstream 1.0kb downstream 4818 true scaffold_4: 31118808-31123625 Theobroma cacao
Thecc1EG020965 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31118808-31119807 Theobroma cacao
Thecc1EG020965 2.0kb upstream 2.0kb upstream 5818 true scaffold_4: 31119808-31125625 Theobroma cacao
Thecc1EG020965 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31123626-31125625 Theobroma cacao
Thecc1EG020965 2.0kb downstream 2.0kb downstream 5818 true scaffold_4: 31117808-31123625 Theobroma cacao
Thecc1EG020965 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31117808-31119807 Theobroma cacao
Thecc1EG020965 5.0kb upstream 5.0kb upstream 8818 true scaffold_4: 31119808-31128625 Theobroma cacao
Thecc1EG020965 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31123626-31128625 Theobroma cacao
Thecc1EG020965 5.0kb downstream 5.0kb downstream 8818 true scaffold_4: 31114808-31123625 Theobroma cacao
Thecc1EG020965 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31114808-31119807 Theobroma cacao
Thecc1EG020965 10.0kb upstream 10.0kb upstream 13818 true scaffold_4: 31119808-31133625 Theobroma cacao
Thecc1EG020965 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31123626-31133625 Theobroma cacao
Thecc1EG020965 10.0kb downstream 10.0kb downstream 13818 true scaffold_4: 31109808-31123625 Theobroma cacao
Thecc1EG020965 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31109808-31119807 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839465 5264 Brassicales-Malvales View MSA
124336488 5266 SBM View MSA
124243871 5268 Malvidae View MSA
124062426 5270 Rosid View MSA
123739967 5271 Pentapetalae View MSA
122796088 5272 Eudicot View MSA
122043625 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349165 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain