Gene : Thecc1EG020939 T. cacao v1.1

Defline:  (1 of 3) K13347 - peroxisomal membrane protein 2 (PXMP2, PMP22) Genomic Order:  2621
Name:  ? Thecc1EG020939 Secondary Identifier:  ? PAC:27454485

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020939 0.5kb upstream 0.5kb upstream 3663 true scaffold_4: 30968314-30971976 Theobroma cacao
Thecc1EG020939 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30968314-30968813 Theobroma cacao
Thecc1EG020939 0.5kb downstream 0.5kb downstream 3663 true scaffold_4: 30968814-30972476 Theobroma cacao
Thecc1EG020939 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30971977-30972476 Theobroma cacao
Thecc1EG020939 1.0kb upstream 1.0kb upstream 4163 true scaffold_4: 30967814-30971976 Theobroma cacao
Thecc1EG020939 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30967814-30968813 Theobroma cacao
Thecc1EG020939 1.0kb downstream 1.0kb downstream 4163 true scaffold_4: 30968814-30972976 Theobroma cacao
Thecc1EG020939 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30971977-30972976 Theobroma cacao
Thecc1EG020939 2.0kb upstream 2.0kb upstream 5163 true scaffold_4: 30966814-30971976 Theobroma cacao
Thecc1EG020939 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30966814-30968813 Theobroma cacao
Thecc1EG020939 2.0kb downstream 2.0kb downstream 5163 true scaffold_4: 30968814-30973976 Theobroma cacao
Thecc1EG020939 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30971977-30973976 Theobroma cacao
Thecc1EG020939 5.0kb upstream 5.0kb upstream 8163 true scaffold_4: 30963814-30971976 Theobroma cacao
Thecc1EG020939 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30963814-30968813 Theobroma cacao
Thecc1EG020939 5.0kb downstream 5.0kb downstream 8163 true scaffold_4: 30968814-30976976 Theobroma cacao
Thecc1EG020939 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30971977-30976976 Theobroma cacao
Thecc1EG020939 10.0kb upstream 10.0kb upstream 13163 true scaffold_4: 30958814-30971976 Theobroma cacao
Thecc1EG020939 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30958814-30968813 Theobroma cacao
Thecc1EG020939 10.0kb downstream 10.0kb downstream 13163 true scaffold_4: 30968814-30981976 Theobroma cacao
Thecc1EG020939 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30971977-30981976 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834598 5264 Brassicales-Malvales View MSA
124341300 5266 SBM View MSA
124243984 5268 Malvidae View MSA
124064630 5270 Rosid View MSA
123740059 5271 Pentapetalae View MSA
122795026 5272 Eudicot View MSA
122043631 5273 Angiosperm View MSA
121345972 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain