Gene : Thecc1EG020889 T. cacao v1.1

Defline:  (1 of 3) PTHR10641//PTHR10641:SF523 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Genomic Order:  2575
Name:  ? Thecc1EG020889 Secondary Identifier:  ? PAC:27455405

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020889 0.5kb upstream 0.5kb upstream 2510 true scaffold_4: 30744726-30747235 Theobroma cacao
Thecc1EG020889 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30744726-30745225 Theobroma cacao
Thecc1EG020889 0.5kb downstream 0.5kb downstream 2510 true scaffold_4: 30745226-30747735 Theobroma cacao
Thecc1EG020889 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30747236-30747735 Theobroma cacao
Thecc1EG020889 1.0kb upstream 1.0kb upstream 3010 true scaffold_4: 30744226-30747235 Theobroma cacao
Thecc1EG020889 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30744226-30745225 Theobroma cacao
Thecc1EG020889 1.0kb downstream 1.0kb downstream 3010 true scaffold_4: 30745226-30748235 Theobroma cacao
Thecc1EG020889 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30747236-30748235 Theobroma cacao
Thecc1EG020889 2.0kb upstream 2.0kb upstream 4010 true scaffold_4: 30743226-30747235 Theobroma cacao
Thecc1EG020889 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30743226-30745225 Theobroma cacao
Thecc1EG020889 2.0kb downstream 2.0kb downstream 4010 true scaffold_4: 30745226-30749235 Theobroma cacao
Thecc1EG020889 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30747236-30749235 Theobroma cacao
Thecc1EG020889 5.0kb upstream 5.0kb upstream 7010 true scaffold_4: 30740226-30747235 Theobroma cacao
Thecc1EG020889 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30740226-30745225 Theobroma cacao
Thecc1EG020889 5.0kb downstream 5.0kb downstream 7010 true scaffold_4: 30745226-30752235 Theobroma cacao
Thecc1EG020889 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30747236-30752235 Theobroma cacao
Thecc1EG020889 10.0kb upstream 10.0kb upstream 12010 true scaffold_4: 30735226-30747235 Theobroma cacao
Thecc1EG020889 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30735226-30745225 Theobroma cacao
Thecc1EG020889 10.0kb downstream 10.0kb downstream 12010 true scaffold_4: 30745226-30757235 Theobroma cacao
Thecc1EG020889 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30747236-30757235 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838422 5264 Brassicales-Malvales View MSA
124349320 5266 SBM View MSA
124251193 5268 Malvidae View MSA
124069462 5270 Rosid View MSA
123753515 5271 Pentapetalae View MSA
122794930 5272 Eudicot View MSA
122045941 5273 Angiosperm View MSA
121350389 5274 Embryophyte View MSA
123381710 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain