Gene : Thecc1EG020891 T. cacao v1.1

Defline:  (1 of 2) K12819 - pre-mRNA-processing factor SLU7 (SLU7) Genomic Order:  2577
Name:  ? Thecc1EG020891 Secondary Identifier:  ? PAC:27453156

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020891 0.5kb upstream 0.5kb upstream 5227 true scaffold_4: 30754106-30759332 Theobroma cacao
Thecc1EG020891 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30754106-30754605 Theobroma cacao
Thecc1EG020891 0.5kb downstream 0.5kb downstream 5227 true scaffold_4: 30754606-30759832 Theobroma cacao
Thecc1EG020891 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30759333-30759832 Theobroma cacao
Thecc1EG020891 1.0kb upstream 1.0kb upstream 5727 true scaffold_4: 30753606-30759332 Theobroma cacao
Thecc1EG020891 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30753606-30754605 Theobroma cacao
Thecc1EG020891 1.0kb downstream 1.0kb downstream 5727 true scaffold_4: 30754606-30760332 Theobroma cacao
Thecc1EG020891 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30759333-30760332 Theobroma cacao
Thecc1EG020891 2.0kb upstream 2.0kb upstream 6727 true scaffold_4: 30752606-30759332 Theobroma cacao
Thecc1EG020891 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30752606-30754605 Theobroma cacao
Thecc1EG020891 2.0kb downstream 2.0kb downstream 6727 true scaffold_4: 30754606-30761332 Theobroma cacao
Thecc1EG020891 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30759333-30761332 Theobroma cacao
Thecc1EG020891 5.0kb upstream 5.0kb upstream 9727 true scaffold_4: 30749606-30759332 Theobroma cacao
Thecc1EG020891 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30749606-30754605 Theobroma cacao
Thecc1EG020891 5.0kb downstream 5.0kb downstream 9727 true scaffold_4: 30754606-30764332 Theobroma cacao
Thecc1EG020891 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30759333-30764332 Theobroma cacao
Thecc1EG020891 10.0kb upstream 10.0kb upstream 14727 true scaffold_4: 30744606-30759332 Theobroma cacao
Thecc1EG020891 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30744606-30754605 Theobroma cacao
Thecc1EG020891 10.0kb downstream 10.0kb downstream 14727 true scaffold_4: 30754606-30769332 Theobroma cacao
Thecc1EG020891 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30759333-30769332 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829420 5264 Brassicales-Malvales View MSA
124339981 5266 SBM View MSA
124238125 5268 Malvidae View MSA
124063285 5270 Rosid View MSA
123752211 5271 Pentapetalae View MSA
122792608 5272 Eudicot View MSA
122043272 5273 Angiosperm View MSA
121344564 5274 Embryophyte View MSA
123424269 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain