Gene : Thecc1EG020869 T. cacao v1.1

Defline:  (1 of 2) PTHR31190//PTHR31190:SF26 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF096 Genomic Order:  2559
Name:  ? Thecc1EG020869 Secondary Identifier:  ? PAC:27453214

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020869 0.5kb upstream 0.5kb upstream 1110 true scaffold_4: 30622279-30623388 Theobroma cacao
Thecc1EG020869 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30622279-30622778 Theobroma cacao
Thecc1EG020869 0.5kb downstream 0.5kb downstream 1110 true scaffold_4: 30622779-30623888 Theobroma cacao
Thecc1EG020869 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30623389-30623888 Theobroma cacao
Thecc1EG020869 1.0kb upstream 1.0kb upstream 1610 true scaffold_4: 30621779-30623388 Theobroma cacao
Thecc1EG020869 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30621779-30622778 Theobroma cacao
Thecc1EG020869 1.0kb downstream 1.0kb downstream 1610 true scaffold_4: 30622779-30624388 Theobroma cacao
Thecc1EG020869 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30623389-30624388 Theobroma cacao
Thecc1EG020869 2.0kb upstream 2.0kb upstream 2610 true scaffold_4: 30620779-30623388 Theobroma cacao
Thecc1EG020869 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30620779-30622778 Theobroma cacao
Thecc1EG020869 2.0kb downstream 2.0kb downstream 2610 true scaffold_4: 30622779-30625388 Theobroma cacao
Thecc1EG020869 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30623389-30625388 Theobroma cacao
Thecc1EG020869 5.0kb upstream 5.0kb upstream 5610 true scaffold_4: 30617779-30623388 Theobroma cacao
Thecc1EG020869 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30617779-30622778 Theobroma cacao
Thecc1EG020869 5.0kb downstream 5.0kb downstream 5610 true scaffold_4: 30622779-30628388 Theobroma cacao
Thecc1EG020869 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30623389-30628388 Theobroma cacao
Thecc1EG020869 10.0kb upstream 10.0kb upstream 10610 true scaffold_4: 30612779-30623388 Theobroma cacao
Thecc1EG020869 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30612779-30622778 Theobroma cacao
Thecc1EG020869 10.0kb downstream 10.0kb downstream 10610 true scaffold_4: 30622779-30633388 Theobroma cacao
Thecc1EG020869 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30623389-30633388 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829575 5264 Brassicales-Malvales View MSA
124349999 5266 SBM View MSA
124254000 5268 Malvidae View MSA
124071371 5270 Rosid View MSA
123752918 5271 Pentapetalae View MSA
122793909 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain