Gene : Thecc1EG020839 T. cacao v1.1
Defline:  (1 of 2) PF05514 - HR-like lesion-inducing (HR_lesion) Genomic Order:  2534
Name:  ? Thecc1EG020839 Secondary Identifier:  ? PAC:27452476
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020839 0.5kb upstream 0.5kb upstream 2505 true scaffold_4: 30512372-30514876 Theobroma cacao
Thecc1EG020839 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30514377-30514876 Theobroma cacao
Thecc1EG020839 0.5kb downstream 0.5kb downstream 2505 true scaffold_4: 30511872-30514376 Theobroma cacao
Thecc1EG020839 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30511872-30512371 Theobroma cacao
Thecc1EG020839 1.0kb upstream 1.0kb upstream 3005 true scaffold_4: 30512372-30515376 Theobroma cacao
Thecc1EG020839 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30514377-30515376 Theobroma cacao
Thecc1EG020839 1.0kb downstream 1.0kb downstream 3005 true scaffold_4: 30511372-30514376 Theobroma cacao
Thecc1EG020839 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30511372-30512371 Theobroma cacao
Thecc1EG020839 2.0kb upstream 2.0kb upstream 4005 true scaffold_4: 30512372-30516376 Theobroma cacao
Thecc1EG020839 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30514377-30516376 Theobroma cacao
Thecc1EG020839 2.0kb downstream 2.0kb downstream 4005 true scaffold_4: 30510372-30514376 Theobroma cacao
Thecc1EG020839 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30510372-30512371 Theobroma cacao
Thecc1EG020839 5.0kb upstream 5.0kb upstream 7005 true scaffold_4: 30512372-30519376 Theobroma cacao
Thecc1EG020839 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30514377-30519376 Theobroma cacao
Thecc1EG020839 5.0kb downstream 5.0kb downstream 7005 true scaffold_4: 30507372-30514376 Theobroma cacao
Thecc1EG020839 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30507372-30512371 Theobroma cacao
Thecc1EG020839 10.0kb upstream 10.0kb upstream 12005 true scaffold_4: 30512372-30524376 Theobroma cacao
Thecc1EG020839 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30514377-30524376 Theobroma cacao
Thecc1EG020839 10.0kb downstream 10.0kb downstream 12005 true scaffold_4: 30502372-30514376 Theobroma cacao
Thecc1EG020839 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30502372-30512371 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836612 5264 Brassicales-Malvales View MSA
124343652 5266 SBM View MSA
124236999 5268 Malvidae View MSA
124068241 5270 Rosid View MSA
123750516 5271 Pentapetalae View MSA
122797406 5272 Eudicot View MSA
122050658 5273 Angiosperm View MSA
121351347 5274 Embryophyte View MSA
123426506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain