Gene : Thecc1EG020823 T. cacao v1.1
Defline:  (1 of 1) PTHR31100//PTHR31100:SF3 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Genomic Order:  2521
Name:  ? Thecc1EG020823 Secondary Identifier:  ? PAC:27454897
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020823 0.5kb upstream 0.5kb upstream 2212 true scaffold_4: 30449909-30452120 Theobroma cacao
Thecc1EG020823 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30451621-30452120 Theobroma cacao
Thecc1EG020823 0.5kb downstream 0.5kb downstream 2212 true scaffold_4: 30449409-30451620 Theobroma cacao
Thecc1EG020823 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30449409-30449908 Theobroma cacao
Thecc1EG020823 1.0kb upstream 1.0kb upstream 2712 true scaffold_4: 30449909-30452620 Theobroma cacao
Thecc1EG020823 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30451621-30452620 Theobroma cacao
Thecc1EG020823 1.0kb downstream 1.0kb downstream 2712 true scaffold_4: 30448909-30451620 Theobroma cacao
Thecc1EG020823 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30448909-30449908 Theobroma cacao
Thecc1EG020823 2.0kb upstream 2.0kb upstream 3712 true scaffold_4: 30449909-30453620 Theobroma cacao
Thecc1EG020823 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30451621-30453620 Theobroma cacao
Thecc1EG020823 2.0kb downstream 2.0kb downstream 3712 true scaffold_4: 30447909-30451620 Theobroma cacao
Thecc1EG020823 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30447909-30449908 Theobroma cacao
Thecc1EG020823 5.0kb upstream 5.0kb upstream 6712 true scaffold_4: 30449909-30456620 Theobroma cacao
Thecc1EG020823 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30451621-30456620 Theobroma cacao
Thecc1EG020823 5.0kb downstream 5.0kb downstream 6712 true scaffold_4: 30444909-30451620 Theobroma cacao
Thecc1EG020823 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30444909-30449908 Theobroma cacao
Thecc1EG020823 10.0kb upstream 10.0kb upstream 11712 true scaffold_4: 30449909-30461620 Theobroma cacao
Thecc1EG020823 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30451621-30461620 Theobroma cacao
Thecc1EG020823 10.0kb downstream 10.0kb downstream 11712 true scaffold_4: 30439909-30451620 Theobroma cacao
Thecc1EG020823 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30439909-30449908 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836211 5264 Brassicales-Malvales View MSA
124346408 5266 SBM View MSA
124251850 5268 Malvidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain