Gene : Thecc1EG020815 T. cacao v1.1
Defline:  (1 of 5) PTHR13301//PTHR13301:SF41 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2511
Name:  ? Thecc1EG020815 Secondary Identifier:  ? PAC:27453088
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1001 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020815 0.5kb upstream 0.5kb upstream 22959 true scaffold_4: 30373691-30396649 Theobroma cacao
Thecc1EG020815 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30373691-30374190 Theobroma cacao
Thecc1EG020815 0.5kb downstream 0.5kb downstream 22959 true scaffold_4: 30374191-30397149 Theobroma cacao
Thecc1EG020815 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30396650-30397149 Theobroma cacao
Thecc1EG020815 1.0kb upstream 1.0kb upstream 23459 true scaffold_4: 30373191-30396649 Theobroma cacao
Thecc1EG020815 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30373191-30374190 Theobroma cacao
Thecc1EG020815 1.0kb downstream 1.0kb downstream 23459 true scaffold_4: 30374191-30397649 Theobroma cacao
Thecc1EG020815 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30396650-30397649 Theobroma cacao
Thecc1EG020815 2.0kb upstream 2.0kb upstream 24459 true scaffold_4: 30372191-30396649 Theobroma cacao
Thecc1EG020815 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30372191-30374190 Theobroma cacao
Thecc1EG020815 2.0kb downstream 2.0kb downstream 24459 true scaffold_4: 30374191-30398649 Theobroma cacao
Thecc1EG020815 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30396650-30398649 Theobroma cacao
Thecc1EG020815 5.0kb upstream 5.0kb upstream 27459 true scaffold_4: 30369191-30396649 Theobroma cacao
Thecc1EG020815 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30369191-30374190 Theobroma cacao
Thecc1EG020815 5.0kb downstream 5.0kb downstream 27459 true scaffold_4: 30374191-30401649 Theobroma cacao
Thecc1EG020815 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30396650-30401649 Theobroma cacao
Thecc1EG020815 10.0kb upstream 10.0kb upstream 32459 true scaffold_4: 30364191-30396649 Theobroma cacao
Thecc1EG020815 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30364191-30374190 Theobroma cacao
Thecc1EG020815 10.0kb downstream 10.0kb downstream 32459 true scaffold_4: 30374191-30406649 Theobroma cacao
Thecc1EG020815 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30396650-30406649 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825402 5264 Brassicales-Malvales View MSA
124348312 5266 SBM View MSA
124245809 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain