Gene : Thecc1EG020807 T. cacao v1.1
Defline:  (1 of 15) PF00917 - MATH domain (MATH) Genomic Order:  2504
Name:  ? Thecc1EG020807 Secondary Identifier:  ? PAC:27455918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020807 0.5kb upstream 0.5kb upstream 11934 true scaffold_4: 30319514-30331447 Theobroma cacao
Thecc1EG020807 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30330948-30331447 Theobroma cacao
Thecc1EG020807 0.5kb downstream 0.5kb downstream 11934 true scaffold_4: 30319014-30330947 Theobroma cacao
Thecc1EG020807 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30319014-30319513 Theobroma cacao
Thecc1EG020807 1.0kb upstream 1.0kb upstream 12434 true scaffold_4: 30319514-30331947 Theobroma cacao
Thecc1EG020807 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30330948-30331947 Theobroma cacao
Thecc1EG020807 1.0kb downstream 1.0kb downstream 12434 true scaffold_4: 30318514-30330947 Theobroma cacao
Thecc1EG020807 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30318514-30319513 Theobroma cacao
Thecc1EG020807 2.0kb upstream 2.0kb upstream 13434 true scaffold_4: 30319514-30332947 Theobroma cacao
Thecc1EG020807 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30330948-30332947 Theobroma cacao
Thecc1EG020807 2.0kb downstream 2.0kb downstream 13434 true scaffold_4: 30317514-30330947 Theobroma cacao
Thecc1EG020807 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30317514-30319513 Theobroma cacao
Thecc1EG020807 5.0kb upstream 5.0kb upstream 16434 true scaffold_4: 30319514-30335947 Theobroma cacao
Thecc1EG020807 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30330948-30335947 Theobroma cacao
Thecc1EG020807 5.0kb downstream 5.0kb downstream 16434 true scaffold_4: 30314514-30330947 Theobroma cacao
Thecc1EG020807 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30314514-30319513 Theobroma cacao
Thecc1EG020807 10.0kb upstream 10.0kb upstream 21434 true scaffold_4: 30319514-30340947 Theobroma cacao
Thecc1EG020807 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30330948-30340947 Theobroma cacao
Thecc1EG020807 10.0kb downstream 10.0kb downstream 21434 true scaffold_4: 30309514-30330947 Theobroma cacao
Thecc1EG020807 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30309514-30319513 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836050 5264 Brassicales-Malvales View MSA
124339994 5266 SBM View MSA
124247807 5268 Malvidae View MSA
124063906 5270 Rosid View MSA
123740151 5271 Pentapetalae View MSA
122794933 5272 Eudicot View MSA
122043519 5273 Angiosperm View MSA
121350769 5274 Embryophyte View MSA
123425613 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain